Gene Smal_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3072 
Symbol 
ID6475971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3432858 
End bp3433253 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content63% 
IMG OID642732267 
Productglycine cleavage system protein H 
Protein accessionYP_002029454 
Protein GI194366844 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.132267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TCCCCGGCGA CCTCAAGTTC CTCAAGTCCC ATGAGTGGGC CCGTGTCGAA 
GGCAATGGCC GCGTGACCGT CGGTATTTCC GACCACGCCC AGGGCCTGCT GGGTGACCTG
GTCTACGTCG AGCTGCCCGA AGTCGGCGCG ACGGCCAAGG CCAACGAGCA GATCGCAGTC
GTTGAGTCGG TGAAGGCCGC CTCCGACGTC TACAGCCCGG TCAGCGGCAC CATCGTCGAG
GTCAACTCGG CGCTGTCGGA CAAGCCGGAA ACCATCAACG AAGATGCCTA CGGCGACGGC
TGGATGTACG TGGTCGAACT GTCCAACGCC GAAGAACTCA ACGAGCTGCT GGATCCGGAC
GCGTACGCCG AAGCACTGGA AGACGAAGAC CACTGA
 
Protein sequence
MSEIPGDLKF LKSHEWARVE GNGRVTVGIS DHAQGLLGDL VYVELPEVGA TAKANEQIAV 
VESVKAASDV YSPVSGTIVE VNSALSDKPE TINEDAYGDG WMYVVELSNA EELNELLDPD
AYAEALEDED H