| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3064 |
|---|
| Symbol | fadE |
|---|
| ID | 6475963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3422523 |
|---|
| End bp | 3425000 |
|---|
| Gene Length | 2478 bp |
|---|
| Protein Length | 825 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642732259 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_002029446 |
|---|
| Protein GI | 194366836 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.221782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.434106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG TTCTTCCCTT CCTCGCCCTG CTGCTGGCAG GCGCGTTCGT CGCCTACCAC
CGCATGCGGC TGGTTACCTG GACGCTGATC AGCGTGGCCC TGCTGGTCGC CTGCTGGTTC
GTGCCCTACG TCAACCAGAC CGCCACGATC GTTGCCGCCG CCGTGCTGGC GGTGATCGCC
GTGCCGCTGC TGCTGCCGTT CATCCGCAAG CCGCTGCTGA CCGGCCCGAT GATGAAGGTG
TTCCGCAAGG TGCTGCCGCC GCTGTCGCAG ACCGAGCGCA TCGCGCTGGA AACCGGCTCG
GTCGGTTTCG AAGGCGAGCT GTTCACCGGT GACCCGGACT GGAACATCCT GCTGAACTAC
CCCAAGCCGC AGCTGACCGC GGAAGAGCAG GCCTTCCTCG ATGGCCCGGT CGAAGAGCTG
TGCAAGATGG TCAACGACTG GGAAATCACC CACGTCCATG CCGACCTGCC GCCGGAACTG
TGGGCCTTCA TCAAGAAGAA CAAGTTCTTC GGCATGATCA TTCCGAAGGA ATACGGCGGC
CTCGGCTTCT CCGCGCTGGC CCACCACAAG GTGATCCAGA AGCTGGCCTC GGTGTCCTCG
GTGGTCAGCT CCACCGTCGG CGTGCCGAAC TCGCTGGGCC CGGGCGAACT GCTGGTGCAT
TACGGCACCC AGGAGCAGAA GGACCAGTAC CTGCCGCGCC TGGCCGATGG CCGCGAAGTG
CCCTGCTTCG GCCTGACCGG CCCGTTCGCC GGCTCCGACG CCACCTCCAT TCCGGACTAC
GGCATCGTCT GCAAGGGCGA GTGGAACGGC GAGCAGGTGC TCGGCGTCAA GCTGACCTTC
GACAAGCGTT ACATCACCCT GGCCCCGGTC GCGTCGCTGA TCGGCCTGGC CTTCCGCATG
TACGACCCGG ATGGCCTGAT CGGTGAAACC CGCGACATCG GCATCACCCT GGGCCTGTTG
CCGCGTGATA CCGCCGGCGT TGAAATCGGT CGCCGCCACT TCCCGCTGAA CTCGACCTTC
CAGAACGGCC CGATCCGCGG CAAGGACGTG TTCATTCCGC TGACCCAGCT GATCGGTGGC
GCTGCCATGG CCGGCAAGGG CTGGAACATG CTCAACGAGT GCCTGGCCGT GGGTCGCTCG
ATCACCCTGC CGTCCACCGC CAGTGGCGGT GCCAAGGCCG GTGCCGCCGT GACCGGCGCC
TATGCGCGCA TCCGCAAGCA GTTCGGCCTG TCGGTCGGCC GCTTCGAGGG CGTGGAAGAA
GCACTGGCCC GCATTGGCGG CAAGGCGTAC AAGATCAGTG CGCTGTCGCA GGCCACCGCA
GCTGCGGTGG ACCGCGGCGA CGTGCCGTCG GTGCCGTCCG CCATTGCCAA GTACCACTGC
ACCAACATGA GCCGTGAAGT GATCTCGGAC ATGATGGACG TGATCGGCGG CAAGGGCATC
ATCCTCGGCC CGCGCAACTT CGCCGGGCGC AGCTGGCAGG CCGCGCCGAT CGCGATCACC
GTGGAAGGCG CCAACATCAT GACCCGCAGC CTGCTGATCT TCGGCCAGGG TGCGATCCTC
TGCCACCCGT GGGTGCTGAA GGAAATGAAG GCCGCGCAGG ATCCGGACAT CCGTGCCGGC
CTGCAGGACT TCGACCGCAG CCTGTTCGGC CACATCCGCT TCGGCATCTC CAATGCCGTG
CGTTCGTTCT GGTTCGGCCT GACCGGCGCG CGCTTCGGCG CTGCCCCGGG CGATGCCTAC
ACCCGCCGCT ACTTCCGCAA GCTGGACCGC TACTCGGCCA ACCTGGCGCT GATGGCTGAC
ATCTCGATGA TGACCCTCGG CGGCAAGCTG AAGTTCAAGG AGTCGCTGTC CGGCCGCCTG
GGCGACGTGC TGAGCCATGT CTACATGACC AGCGCCATGC TCAAGCGCTA CCACGACGAA
GGCGCACCGC AGGCCGACCA GCCGCTGCTG GCCTGGGCCT TCCATGACAG CGTGCACAAG
ATCGAGGAAT CGCTGTCGGC GGCCCTGCGC AACTTCCCGA TCCGACCGAT CGGCTGGCTG
ATGTGGGCAC TGATCTTCCC GCTGGGCCGT CGCGCCGAGG CACCGGGCGA TCGCCTGAGC
CGCCGCGTGG CCGCCCTGCT GATGGCTCCG AACGAAGCGC GTGACCGTCT GGCCAGCGGC
GTGTTCCTGA CCCCCTGCGA GAACAACCCG GGTGGCCGCA TCAACAGCTA CCTGAGCAAG
GCGATCATGG CCGAGCCGGT GGAGCGCAAG TTCCTGAAGG CGCTGAAGAG CAAGGGCATC
GAAGCGCTGG ACTTCAACAG CCAGCTGGAC GAAGCCGTGG CCGAGGGCGT GATCACCCAG
GACGAGCGCA GCCTGCTGGA AGAACTGCGC ACGCTGACCC TGGACACCAT CACCGTGGAC
GATTTCGACA CCCACGAACT GCGCGCGGCC AGCTACTACG ACCGCCAGCA CAAGGACCCG
CACTCGCAGG CAGCCTGA
|
|---|
| Protein sequence | MSIVLPFLAL LLAGAFVAYH RMRLVTWTLI SVALLVACWF VPYVNQTATI VAAAVLAVIA
VPLLLPFIRK PLLTGPMMKV FRKVLPPLSQ TERIALETGS VGFEGELFTG DPDWNILLNY
PKPQLTAEEQ AFLDGPVEEL CKMVNDWEIT HVHADLPPEL WAFIKKNKFF GMIIPKEYGG
LGFSALAHHK VIQKLASVSS VVSSTVGVPN SLGPGELLVH YGTQEQKDQY LPRLADGREV
PCFGLTGPFA GSDATSIPDY GIVCKGEWNG EQVLGVKLTF DKRYITLAPV ASLIGLAFRM
YDPDGLIGET RDIGITLGLL PRDTAGVEIG RRHFPLNSTF QNGPIRGKDV FIPLTQLIGG
AAMAGKGWNM LNECLAVGRS ITLPSTASGG AKAGAAVTGA YARIRKQFGL SVGRFEGVEE
ALARIGGKAY KISALSQATA AAVDRGDVPS VPSAIAKYHC TNMSREVISD MMDVIGGKGI
ILGPRNFAGR SWQAAPIAIT VEGANIMTRS LLIFGQGAIL CHPWVLKEMK AAQDPDIRAG
LQDFDRSLFG HIRFGISNAV RSFWFGLTGA RFGAAPGDAY TRRYFRKLDR YSANLALMAD
ISMMTLGGKL KFKESLSGRL GDVLSHVYMT SAMLKRYHDE GAPQADQPLL AWAFHDSVHK
IEESLSAALR NFPIRPIGWL MWALIFPLGR RAEAPGDRLS RRVAALLMAP NEARDRLASG
VFLTPCENNP GGRINSYLSK AIMAEPVERK FLKALKSKGI EALDFNSQLD EAVAEGVITQ
DERSLLEELR TLTLDTITVD DFDTHELRAA SYYDRQHKDP HSQAA
|
|---|
| |