Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3040 |
Symbol | |
ID | 6475857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3389572 |
End bp | 3390981 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642732235 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002029422 |
Protein GI | 194366812 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.071182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAT CGCCATCGAC CTACACCCGC CAGCGCCCCT TGCTGTGGCT GGTTTCGTTG GCGATCTTCA TGCAGATGCT GGACTCGACC ATCGTCAACA CGGCCTTGCC GGCGATGGCG GCCAGCCTGG GCGAAAGCCC GCTGCAGATG CAGTCGGTGG TGTTCAGCTA CGCGCTGGCG GTGGCCACTT TCATCCCTGC CTCCGGCTGG ATTGCCGACC GCTACGGCAC GCGTCGTACC TTCCTGGTAG CGATCATCCT GTTCACCCTC GGCTCGCTGG CCTGCGCGCT GGCCCAGCAC CTGCACCAGC TGGTTGGGGC ACGTGTGCTG CAGGGTATCG GCGGTGCAAT GCTGCTGCCG GTCGGCCGCT TGGCAGTGAT GCGTTCGGTG CCACGCGAGG ACTTCCTGCG CGCGATGAGC TTCATCGCCA TCCCCGCGCT GGTCGGCCCG TTGATCGGCC CGACGTTGGG TGGCTGGCTG GTCGAGATCG CATCGTGGCA CTGGGTGTTC CTGATCAACC TGCCGATCGG CGTGATCGGT TTCATCGCCG CGATGAAGAT CATGCCCGAC CACTACGCCA GCCATCGCAC CCGTTTCGAC CTGCGCGGCT ACATCATGCT GGCCTTCGCG ATGGTGGTGC TGTCGCTGGC GCTGGACGGC ATCTCCGGGC TCGGTACGCC ACACGCGTTG GTGATGCTGA TGACCGTGGC CGGCCTGGCG GCGCTGGTGG GTTACTGGCT GCACGCCGCC AACTCGACCG CGCCGTTGTT CTCGCTGGCG CTGTTCCGCG TGCCCAGCTA CCGCATCGGC ATCCTTGGCA ATCTGTTCTC ACGCATCGGC AGCAGCGCCA TGCCGATGCT GATCCCGTTG CTGCTGCAGG TCGGCCTCGG CCTCGGCCCG ATGAACGCAG GACTGATGAT GGTGCCGGTG GCGGCCGCCG GCATGGTCTC AAAGAAGCTG GCGGTGAAGC TGGTCGAGCG CTACGGCTAC CGCCGCGTGC TGATGGTCAA CACCGTGCTG GTGGGCCTGG CGATGGCCAG CTTCATCCTG ATGACGCCCG GCCAGCACCT GGCCTGGCGC CTGCTGCAGC TGGCCTTCTT CGGCGCGGTC AATTCGCTGC AGTTCACCGT GATGAACACC GTGACCCTGC GTGATCTGGA CCGCGAATTC GCCAGTTCCG GCAACAGCCT GCTGTCGATG GTGATGATGC TCGCAGCCGG TTTCGGTGCC GCCGCCGCCG GCAGCCTGCT GGCCGCGTTC GGCAGTCACC TGGACAGCGA CAGTGCGACG TCGGCGCTGC ACGCCACCTT CCTGTGCGTG GGTGCGATCA CCCTGACCTC GACGATGATC TTCTGGCAGC TGCCCGATAC CAAGCCGGAG CCACGGCAGG TCGAGCACGT CGCGGAGTGA
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Protein sequence | MSTSPSTYTR QRPLLWLVSL AIFMQMLDST IVNTALPAMA ASLGESPLQM QSVVFSYALA VATFIPASGW IADRYGTRRT FLVAIILFTL GSLACALAQH LHQLVGARVL QGIGGAMLLP VGRLAVMRSV PREDFLRAMS FIAIPALVGP LIGPTLGGWL VEIASWHWVF LINLPIGVIG FIAAMKIMPD HYASHRTRFD LRGYIMLAFA MVVLSLALDG ISGLGTPHAL VMLMTVAGLA ALVGYWLHAA NSTAPLFSLA LFRVPSYRIG ILGNLFSRIG SSAMPMLIPL LLQVGLGLGP MNAGLMMVPV AAAGMVSKKL AVKLVERYGY RRVLMVNTVL VGLAMASFIL MTPGQHLAWR LLQLAFFGAV NSLQFTVMNT VTLRDLDREF ASSGNSLLSM VMMLAAGFGA AAAGSLLAAF GSHLDSDSAT SALHATFLCV GAITLTSTMI FWQLPDTKPE PRQVEHVAE
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