Gene Smal_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3040 
Symbol 
ID6475857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3389572 
End bp3390981 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content66% 
IMG OID642732235 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_002029422 
Protein GI194366812 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.071182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAT CGCCATCGAC CTACACCCGC CAGCGCCCCT TGCTGTGGCT GGTTTCGTTG 
GCGATCTTCA TGCAGATGCT GGACTCGACC ATCGTCAACA CGGCCTTGCC GGCGATGGCG
GCCAGCCTGG GCGAAAGCCC GCTGCAGATG CAGTCGGTGG TGTTCAGCTA CGCGCTGGCG
GTGGCCACTT TCATCCCTGC CTCCGGCTGG ATTGCCGACC GCTACGGCAC GCGTCGTACC
TTCCTGGTAG CGATCATCCT GTTCACCCTC GGCTCGCTGG CCTGCGCGCT GGCCCAGCAC
CTGCACCAGC TGGTTGGGGC ACGTGTGCTG CAGGGTATCG GCGGTGCAAT GCTGCTGCCG
GTCGGCCGCT TGGCAGTGAT GCGTTCGGTG CCACGCGAGG ACTTCCTGCG CGCGATGAGC
TTCATCGCCA TCCCCGCGCT GGTCGGCCCG TTGATCGGCC CGACGTTGGG TGGCTGGCTG
GTCGAGATCG CATCGTGGCA CTGGGTGTTC CTGATCAACC TGCCGATCGG CGTGATCGGT
TTCATCGCCG CGATGAAGAT CATGCCCGAC CACTACGCCA GCCATCGCAC CCGTTTCGAC
CTGCGCGGCT ACATCATGCT GGCCTTCGCG ATGGTGGTGC TGTCGCTGGC GCTGGACGGC
ATCTCCGGGC TCGGTACGCC ACACGCGTTG GTGATGCTGA TGACCGTGGC CGGCCTGGCG
GCGCTGGTGG GTTACTGGCT GCACGCCGCC AACTCGACCG CGCCGTTGTT CTCGCTGGCG
CTGTTCCGCG TGCCCAGCTA CCGCATCGGC ATCCTTGGCA ATCTGTTCTC ACGCATCGGC
AGCAGCGCCA TGCCGATGCT GATCCCGTTG CTGCTGCAGG TCGGCCTCGG CCTCGGCCCG
ATGAACGCAG GACTGATGAT GGTGCCGGTG GCGGCCGCCG GCATGGTCTC AAAGAAGCTG
GCGGTGAAGC TGGTCGAGCG CTACGGCTAC CGCCGCGTGC TGATGGTCAA CACCGTGCTG
GTGGGCCTGG CGATGGCCAG CTTCATCCTG ATGACGCCCG GCCAGCACCT GGCCTGGCGC
CTGCTGCAGC TGGCCTTCTT CGGCGCGGTC AATTCGCTGC AGTTCACCGT GATGAACACC
GTGACCCTGC GTGATCTGGA CCGCGAATTC GCCAGTTCCG GCAACAGCCT GCTGTCGATG
GTGATGATGC TCGCAGCCGG TTTCGGTGCC GCCGCCGCCG GCAGCCTGCT GGCCGCGTTC
GGCAGTCACC TGGACAGCGA CAGTGCGACG TCGGCGCTGC ACGCCACCTT CCTGTGCGTG
GGTGCGATCA CCCTGACCTC GACGATGATC TTCTGGCAGC TGCCCGATAC CAAGCCGGAG
CCACGGCAGG TCGAGCACGT CGCGGAGTGA
 
Protein sequence
MSTSPSTYTR QRPLLWLVSL AIFMQMLDST IVNTALPAMA ASLGESPLQM QSVVFSYALA 
VATFIPASGW IADRYGTRRT FLVAIILFTL GSLACALAQH LHQLVGARVL QGIGGAMLLP
VGRLAVMRSV PREDFLRAMS FIAIPALVGP LIGPTLGGWL VEIASWHWVF LINLPIGVIG
FIAAMKIMPD HYASHRTRFD LRGYIMLAFA MVVLSLALDG ISGLGTPHAL VMLMTVAGLA
ALVGYWLHAA NSTAPLFSLA LFRVPSYRIG ILGNLFSRIG SSAMPMLIPL LLQVGLGLGP
MNAGLMMVPV AAAGMVSKKL AVKLVERYGY RRVLMVNTVL VGLAMASFIL MTPGQHLAWR
LLQLAFFGAV NSLQFTVMNT VTLRDLDREF ASSGNSLLSM VMMLAAGFGA AAAGSLLAAF
GSHLDSDSAT SALHATFLCV GAITLTSTMI FWQLPDTKPE PRQVEHVAE