Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3023 |
Symbol | |
ID | 6475840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3368700 |
End bp | 3373607 |
Gene Length | 4908 bp |
Protein Length | 1635 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642732218 |
Product | alpha-2-macroglobulin domain protein |
Protein accession | YP_002029405 |
Protein GI | 194366795 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.114034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.481242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTC CGGCACGGCG GAAGCGGTGG GGATGGGCGG CGGCGGTACT GGCAGGAGGC CTGTTGCTGG GCCTGGCCGG CTGCCGCAAC GACAGCGGGC AGCTGCCCAA GAGCAGCGGT GAGGCCATCA CCACCAAGGC CGAGCAGGTG AAGGAATTCA CCCTGCTGCG CGCTTACCCG GACCGGAAGA ATGAAGGCCT GTCGCTGGCG CTGGAGTTCT CGCGCCCGCT GGTCGGCACC CAGGATTTCG ACAAGCTGGT GCGCTTCGAA GAGAAGGTCG GCACCGACGA CAGCAGCTGG ACGCTGTCCG ATGACGGCCT GACCCTGCGT TACCCGTTCG TCGAGGCTGG CAAGGAGTTC AGCCTGGTGG TCTCGCCGGA CCTGCTGGCC GCCGATGGCA GCCGCCTGGG CAAGGAACTG AAGCAGAAGG TGTTCAGCGG CGAGCTGAAG CCGGTGGTCG GTTTCGCCTC GCAGGGCAGC GTTCTGCCGG CCAAGGACAG CCGTGGCCTG CCGGTGGTCT CGGTGAACGT GCCCGAGGTT GATGTTGAAT TCCTGCGCGT GCGCGAGAAG GACCTGCCGA CTTTCTTCAG CCAGTACCAG CGCGGTGGCC GCCGCGGCAG CTGGGAGCTG AGCAGTGACT ACGAGCGCAG CCCGATCAAC AAGCTGGCCG AGCCGGTCTA CGTCAACCGC TTCATCCTTG GTGGCAAGAA GAACGAGCGG GTGCTGACCT ACCTGCCGAC CCAGGACATC AAGGAACTGC AGGAGCCAGG CCTGTACTTC GCCCTGCTCA AGCGTACCGG CGACTATGAA GGCGAGTTCG ATACCGCGTT CTTCTCGGTC AGCGACATCG GCCTGCATAC CCGCGCCTAC AAGGACAAGC TGTTCGTGCA CACCGCCGGC CTCAAGGACG GTGCGCCGCT GAAGGGCATC GACCTGCGCG TGCTCGACGC CAAGGGCGAG GTGGTGCTGA AGGGCAGCAC CGACGGCAAC GGCAATGCGC TGCTGAACTA CACGCTGGAT GCCACCCACG TGCTGGTCGC CAGCACGGGC AAGGACACCA GCTTCCTGCC GTTCAACCAG CCGGCGCTGG ACCTGAGCGA ATTTGCCGTG GCCGGTCGTG ACAATGCCTG GTTCGACGTT TACGCCTGGT CCGGCCGTGA CCTGTACCGC CCGGGCGAGA CCGTGCGCCT GTCCGCCCTG CTGCGCGACA ACGATGGCAA GCCGGTCAAG GCACAGCCGG TGTTCCTGCG CCTGAAGCAG CCCGACGGCA AGACCTTCCG CGAGACCCGC CTGCAGCCGG GCGAGCAGGG CTACATCAAC TTCGAGCAGG TGATCCCCGC CGAGGCGCCG ACCGGGCGCT GGCAGGTCGA GTTCCGCACC GATCCGGCCA GCAAGGAAGC GATCCAGGGC ATGACCCTGC GCATCGAGGA GTTCCTGCCC GAGCGCATGA AGCTGGACCT GGACAGCGCG CAGAAGACGC TGAAGCCGGG CGAGGACCTG CGCCTGCAGG CCAATGGTGC CTACCTGTAC GGTGCGCCGG CCGACGGCAA CCGTTTCACT GCGCGCATGG CGGTGGCCGC CGAACAGCAG CCAGTCGAAG GCCTGCCGGG CTACTTCTTC GGTGACCCGA CCCTGCAGCT GCCGCGCGAA GCCAAGGACG TGATCGACTC CACGCTGCCG GGCAACGGCC AGCTGCGTGA GGATGTGGCA TTGCCGGAAG AGGCCGCCAA GGCCAAGGCA CCGATCGCCG TGGTGCTGTC CGGCAGCCTG TATGAAACCG GTGGCCGTAC CGTCACCCGT ACCCTGAAGC GGGTGATGTG GCCGGCCAAC GCGCTGGTTG GCGTGCGCCC GCTGTTCAAC CCCGAGGATG GTGCCGACTC CAACGGCAAT GCGCGCTTCG AGCTGATGCG CGTGGATGCC GCCGGCAAGC CGCAGCCGGC CAATGGCCTG AAGATCACCC TGGTGCGCGA ACTGCGCGAC TACCACTGGA CCTTCAACGA CAACCGCTGG GACTACGATT TCACCCGCCG TTTCGAGAAC AAGGAAACCC GCACCGTCGA TGCCGGCAGC AGCGCGGTCG CCTTCGATTT CCCGGTGGAG TGGGGCGAGT ACCGGGTGGA CGTGTTCGAT CCGTCCACCG GCCTGACCAG CCGTTACCCG TTCCGCGCCG GCTGGAGCTG GGGCGATGAC AACCGTGGCC TGGATGCACG CCCGGACAAG GTCAAGCTGG GCCTGGACAA GACCGGCTAC AAGGCCGGTG ACACCCTGGA AGTGACGGTG ACCCCGCCGC ATGCCGGCAA GGGCATCCTG ATGGTCGAGA CCGACCGCAT GCTGTACGTG CAGGACATCG AGGCCAAGCC GGGTTCGACC TTCAAGATTC CGGTCACCGC CGATTGGGAG CGCCACGACG TCTACATCAC CGCACTGGTG TTCCGCGGCG GCAGCGCGCC GAGCAAGATC ACCCCGGCCC GTGCTGTGGG CGTGGTGCAT GTGCCGATGG ACCGCAAGGG CCGCACCGTG GCGGTCGGCC TGGTGGCGCC CAAGCAGATG CGCCCGGAGC AGGACCTGCC GGTGACGGTC AGTGCACCGC AGCTGGCCGG CAAGATGGCG CACGTCACCG TCTCGGCGGT GGACGTGGGC ATCCTCAACA TCACCCGCTT CCCGGTGCCC GATGCCGGTG CGCACTTCTT CGCCCAGCGT CGCCTCGGCA TCGATGCCTA CGACATCTAC AGCCGGGTGA TCGAGAGCTT TGATGGCGGT GCCGGCAAGC TGAAGTTCGG TGGCGACATG GCGTTGCAGG CATTGCCGCA GGCCAAGCGC CCGACCGCGC GCGTGCAGAC CGTGGACCTG TTCTCCGGCC CGGTGCAGCT CGATGCCAAG GGCATCGCCC GCATCCGCCT GAAGGTGCCG GACTTCAACG GCACGCTGCG GGTGTCGGCA CTGGTCTACA GCGATGACCA GTACGGCAAG CGCGATGTGG AAACCGTGGT GCGCGCGCCG ATCCTGGCCG AAGCCAGCAT GCCGCGCGTG CTCGCCCCGG GCGACCGCAG CACCGTGACC CTGGACGTGC AGAACTTCAC CGGCAAGCCG GGCCAGTTCA ACGTGAAGGT GGAAAGCGAA GGCCCGCTGA ACCTGGGCGA GGGCAGCCGC AGCGTGCAGT TGAATGCTGA TGCCAAGACA ACGCTGAGTT TCCCGCTGTC GGCGCGTGAG GGCCACAGCG TGGCCAAGGT GCGCGTACGT GTGGACGGCA ACGGCTTCAA GGCTGATCGC CGCTACGAGC TGCCGGTGCG TGCGGCGTGG CCGCAGGTGC TGCGTTCGCA GGTGCGCACG CTGGATCCGC TGGCAGCGGT CAGTCTCGAC AACAGCCTGA CCGATGGCCT GATGTCCGAG TCGGTGAATG CCCGCCTGCT GGTCAGCCCG CTGCCGCCGA TCCCGTTCGC CAGTGCGCTG CAGGGCGCGC TGAACTACCC GTACGGCTGT GCCGAGCAGA CCACCAGCAA GGGCTACGCC GCGCTGATCC TGGACCAGGC GACGTCGTCG ATGCTCGGTG CCGACGGGCT GGATGCCAAG ACCCGCCGCG AGCGCATGGA AGGCGCATTC GGCCGCCTGG CGTCGATGCA GGTGGCCAAT GGCAACTTCT CGATGTGGGG GGACGACGGC TATGTGAACC CGTGGCTGAC CCCGTACATC ACCGAGTTCC TGCTCGATGC CAAGGATGCC GGCTTCGCGG TGCCCGACAA CGTGCTGCAG AAGGCACTGA ACCGTCTCAG CGAGGATCTG TTGTCCGGTG GCAACCAGTT CTACGGCCAG GACGACCGCG AAAAGCTGAA GTTCGCCAAC CAGGCGTATT CGGGCTACGT GCTGGCCCGG GTCAACCGTG CGCCGCTGGG TACCCTGCGC ACGCTGTACG ACAACGAGCG CAGCAAGGCG GTCGGCGGCC TGTCGCTGGT CCATCTGGGC GTGGCGCTGT CGCTGCAGGG CGATGCCAAG CGCGGTCAGG CCGCGCTGGC CGCGGCCTTC GCCAAGTCCA GCAGCGAACG CCCGTCGTAC TTCGGCGACT ACGGCAGTGC GATCCGTGAT GACGCGCTGA TGATCGCGCT GACCCACGAA AACAAGCTGG CCAAGCCCGC GTGGGACGCG CGTGCGGTGG ATCTCGGCCG TGGCCTGGAT GCGCGCCGCA ATGCCGGCTG GATGTGGCTG AGCACGCAGG AGCAGGTGGC CATCGCCCGT CTTGGCAAGG CCCTGGCCGC CAACCAGAAG GCACTGGTGG CCGGTGAACT GGTGATTGGT GGCAACACCG AAGCCATCGG CGAGCGAAAG CTGTTCGGCC GCAACTTCAG CGCCAGTGAG CTGGCCAGCG GCGTGCGCTT CACCCCGCAG GGCCAGCCGC CGATGTTCGC CAGCATCGAC GTGGCCGGCA TCCCGCGCAG CGCGCCGGCA CCGGACAACA GTGTGCTGGG CATTGAGCGC AGCTACTACG GCACCGATGG CAAGCCGTGG TCGCCGCGTC CGCTGAAGGA AGGCGAAGCC CTGATCGTGC GCGTGACGGT CACCGCCGAC ACCACGATGC CCGATGCCCT GCTGACCGAC CTGTTGCCGG CGGGTCTGGA GATCGAGAAC TTCAATCTGG GCGACGCCAA GCAGTGGGCC GATGTGGTGG TTGATGGCAT CACCATCAGC GACCGCGGTG AAGCCGCCGA CACCAAGCAT GAGGAGTTCC GCGACGACCG CTATGTGGCC GCGCTGAAGC TCTCGCGTGG CAGCAAGGCC AACGTGTTCT ATCTGGTGCG CGCGGTGACC CCGGGTACTT ACTCGGTGCC GCCGCCGCTG GTGGAGGACA TGTACCGGCC GCAGCTGCGT GGCGTCGGCC GCAGCAACCC GACCACGATC ACGGTGGTAC AGCCGTGA
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Protein sequence | MSGPARRKRW GWAAAVLAGG LLLGLAGCRN DSGQLPKSSG EAITTKAEQV KEFTLLRAYP DRKNEGLSLA LEFSRPLVGT QDFDKLVRFE EKVGTDDSSW TLSDDGLTLR YPFVEAGKEF SLVVSPDLLA ADGSRLGKEL KQKVFSGELK PVVGFASQGS VLPAKDSRGL PVVSVNVPEV DVEFLRVREK DLPTFFSQYQ RGGRRGSWEL SSDYERSPIN KLAEPVYVNR FILGGKKNER VLTYLPTQDI KELQEPGLYF ALLKRTGDYE GEFDTAFFSV SDIGLHTRAY KDKLFVHTAG LKDGAPLKGI DLRVLDAKGE VVLKGSTDGN GNALLNYTLD ATHVLVASTG KDTSFLPFNQ PALDLSEFAV AGRDNAWFDV YAWSGRDLYR PGETVRLSAL LRDNDGKPVK AQPVFLRLKQ PDGKTFRETR LQPGEQGYIN FEQVIPAEAP TGRWQVEFRT DPASKEAIQG MTLRIEEFLP ERMKLDLDSA QKTLKPGEDL RLQANGAYLY GAPADGNRFT ARMAVAAEQQ PVEGLPGYFF GDPTLQLPRE AKDVIDSTLP GNGQLREDVA LPEEAAKAKA PIAVVLSGSL YETGGRTVTR TLKRVMWPAN ALVGVRPLFN PEDGADSNGN ARFELMRVDA AGKPQPANGL KITLVRELRD YHWTFNDNRW DYDFTRRFEN KETRTVDAGS SAVAFDFPVE WGEYRVDVFD PSTGLTSRYP FRAGWSWGDD NRGLDARPDK VKLGLDKTGY KAGDTLEVTV TPPHAGKGIL MVETDRMLYV QDIEAKPGST FKIPVTADWE RHDVYITALV FRGGSAPSKI TPARAVGVVH VPMDRKGRTV AVGLVAPKQM RPEQDLPVTV SAPQLAGKMA HVTVSAVDVG ILNITRFPVP DAGAHFFAQR RLGIDAYDIY SRVIESFDGG AGKLKFGGDM ALQALPQAKR PTARVQTVDL FSGPVQLDAK GIARIRLKVP DFNGTLRVSA LVYSDDQYGK RDVETVVRAP ILAEASMPRV LAPGDRSTVT LDVQNFTGKP GQFNVKVESE GPLNLGEGSR SVQLNADAKT TLSFPLSARE GHSVAKVRVR VDGNGFKADR RYELPVRAAW PQVLRSQVRT LDPLAAVSLD NSLTDGLMSE SVNARLLVSP LPPIPFASAL QGALNYPYGC AEQTTSKGYA ALILDQATSS MLGADGLDAK TRRERMEGAF GRLASMQVAN GNFSMWGDDG YVNPWLTPYI TEFLLDAKDA GFAVPDNVLQ KALNRLSEDL LSGGNQFYGQ DDREKLKFAN QAYSGYVLAR VNRAPLGTLR TLYDNERSKA VGGLSLVHLG VALSLQGDAK RGQAALAAAF AKSSSERPSY FGDYGSAIRD DALMIALTHE NKLAKPAWDA RAVDLGRGLD ARRNAGWMWL STQEQVAIAR LGKALAANQK ALVAGELVIG GNTEAIGERK LFGRNFSASE LASGVRFTPQ GQPPMFASID VAGIPRSAPA PDNSVLGIER SYYGTDGKPW SPRPLKEGEA LIVRVTVTAD TTMPDALLTD LLPAGLEIEN FNLGDAKQWA DVVVDGITIS DRGEAADTKH EEFRDDRYVA ALKLSRGSKA NVFYLVRAVT PGTYSVPPPL VEDMYRPQLR GVGRSNPTTI TVVQP
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