Gene Smal_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3023 
Symbol 
ID6475840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3368700 
End bp3373607 
Gene Length4908 bp 
Protein Length1635 aa 
Translation table11 
GC content67% 
IMG OID642732218 
Productalpha-2-macroglobulin domain protein 
Protein accessionYP_002029405 
Protein GI194366795 
COG category[R] General function prediction only 
COG ID[COG2373] Large extracellular alpha-helical protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.114034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.481242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTC CGGCACGGCG GAAGCGGTGG GGATGGGCGG CGGCGGTACT GGCAGGAGGC 
CTGTTGCTGG GCCTGGCCGG CTGCCGCAAC GACAGCGGGC AGCTGCCCAA GAGCAGCGGT
GAGGCCATCA CCACCAAGGC CGAGCAGGTG AAGGAATTCA CCCTGCTGCG CGCTTACCCG
GACCGGAAGA ATGAAGGCCT GTCGCTGGCG CTGGAGTTCT CGCGCCCGCT GGTCGGCACC
CAGGATTTCG ACAAGCTGGT GCGCTTCGAA GAGAAGGTCG GCACCGACGA CAGCAGCTGG
ACGCTGTCCG ATGACGGCCT GACCCTGCGT TACCCGTTCG TCGAGGCTGG CAAGGAGTTC
AGCCTGGTGG TCTCGCCGGA CCTGCTGGCC GCCGATGGCA GCCGCCTGGG CAAGGAACTG
AAGCAGAAGG TGTTCAGCGG CGAGCTGAAG CCGGTGGTCG GTTTCGCCTC GCAGGGCAGC
GTTCTGCCGG CCAAGGACAG CCGTGGCCTG CCGGTGGTCT CGGTGAACGT GCCCGAGGTT
GATGTTGAAT TCCTGCGCGT GCGCGAGAAG GACCTGCCGA CTTTCTTCAG CCAGTACCAG
CGCGGTGGCC GCCGCGGCAG CTGGGAGCTG AGCAGTGACT ACGAGCGCAG CCCGATCAAC
AAGCTGGCCG AGCCGGTCTA CGTCAACCGC TTCATCCTTG GTGGCAAGAA GAACGAGCGG
GTGCTGACCT ACCTGCCGAC CCAGGACATC AAGGAACTGC AGGAGCCAGG CCTGTACTTC
GCCCTGCTCA AGCGTACCGG CGACTATGAA GGCGAGTTCG ATACCGCGTT CTTCTCGGTC
AGCGACATCG GCCTGCATAC CCGCGCCTAC AAGGACAAGC TGTTCGTGCA CACCGCCGGC
CTCAAGGACG GTGCGCCGCT GAAGGGCATC GACCTGCGCG TGCTCGACGC CAAGGGCGAG
GTGGTGCTGA AGGGCAGCAC CGACGGCAAC GGCAATGCGC TGCTGAACTA CACGCTGGAT
GCCACCCACG TGCTGGTCGC CAGCACGGGC AAGGACACCA GCTTCCTGCC GTTCAACCAG
CCGGCGCTGG ACCTGAGCGA ATTTGCCGTG GCCGGTCGTG ACAATGCCTG GTTCGACGTT
TACGCCTGGT CCGGCCGTGA CCTGTACCGC CCGGGCGAGA CCGTGCGCCT GTCCGCCCTG
CTGCGCGACA ACGATGGCAA GCCGGTCAAG GCACAGCCGG TGTTCCTGCG CCTGAAGCAG
CCCGACGGCA AGACCTTCCG CGAGACCCGC CTGCAGCCGG GCGAGCAGGG CTACATCAAC
TTCGAGCAGG TGATCCCCGC CGAGGCGCCG ACCGGGCGCT GGCAGGTCGA GTTCCGCACC
GATCCGGCCA GCAAGGAAGC GATCCAGGGC ATGACCCTGC GCATCGAGGA GTTCCTGCCC
GAGCGCATGA AGCTGGACCT GGACAGCGCG CAGAAGACGC TGAAGCCGGG CGAGGACCTG
CGCCTGCAGG CCAATGGTGC CTACCTGTAC GGTGCGCCGG CCGACGGCAA CCGTTTCACT
GCGCGCATGG CGGTGGCCGC CGAACAGCAG CCAGTCGAAG GCCTGCCGGG CTACTTCTTC
GGTGACCCGA CCCTGCAGCT GCCGCGCGAA GCCAAGGACG TGATCGACTC CACGCTGCCG
GGCAACGGCC AGCTGCGTGA GGATGTGGCA TTGCCGGAAG AGGCCGCCAA GGCCAAGGCA
CCGATCGCCG TGGTGCTGTC CGGCAGCCTG TATGAAACCG GTGGCCGTAC CGTCACCCGT
ACCCTGAAGC GGGTGATGTG GCCGGCCAAC GCGCTGGTTG GCGTGCGCCC GCTGTTCAAC
CCCGAGGATG GTGCCGACTC CAACGGCAAT GCGCGCTTCG AGCTGATGCG CGTGGATGCC
GCCGGCAAGC CGCAGCCGGC CAATGGCCTG AAGATCACCC TGGTGCGCGA ACTGCGCGAC
TACCACTGGA CCTTCAACGA CAACCGCTGG GACTACGATT TCACCCGCCG TTTCGAGAAC
AAGGAAACCC GCACCGTCGA TGCCGGCAGC AGCGCGGTCG CCTTCGATTT CCCGGTGGAG
TGGGGCGAGT ACCGGGTGGA CGTGTTCGAT CCGTCCACCG GCCTGACCAG CCGTTACCCG
TTCCGCGCCG GCTGGAGCTG GGGCGATGAC AACCGTGGCC TGGATGCACG CCCGGACAAG
GTCAAGCTGG GCCTGGACAA GACCGGCTAC AAGGCCGGTG ACACCCTGGA AGTGACGGTG
ACCCCGCCGC ATGCCGGCAA GGGCATCCTG ATGGTCGAGA CCGACCGCAT GCTGTACGTG
CAGGACATCG AGGCCAAGCC GGGTTCGACC TTCAAGATTC CGGTCACCGC CGATTGGGAG
CGCCACGACG TCTACATCAC CGCACTGGTG TTCCGCGGCG GCAGCGCGCC GAGCAAGATC
ACCCCGGCCC GTGCTGTGGG CGTGGTGCAT GTGCCGATGG ACCGCAAGGG CCGCACCGTG
GCGGTCGGCC TGGTGGCGCC CAAGCAGATG CGCCCGGAGC AGGACCTGCC GGTGACGGTC
AGTGCACCGC AGCTGGCCGG CAAGATGGCG CACGTCACCG TCTCGGCGGT GGACGTGGGC
ATCCTCAACA TCACCCGCTT CCCGGTGCCC GATGCCGGTG CGCACTTCTT CGCCCAGCGT
CGCCTCGGCA TCGATGCCTA CGACATCTAC AGCCGGGTGA TCGAGAGCTT TGATGGCGGT
GCCGGCAAGC TGAAGTTCGG TGGCGACATG GCGTTGCAGG CATTGCCGCA GGCCAAGCGC
CCGACCGCGC GCGTGCAGAC CGTGGACCTG TTCTCCGGCC CGGTGCAGCT CGATGCCAAG
GGCATCGCCC GCATCCGCCT GAAGGTGCCG GACTTCAACG GCACGCTGCG GGTGTCGGCA
CTGGTCTACA GCGATGACCA GTACGGCAAG CGCGATGTGG AAACCGTGGT GCGCGCGCCG
ATCCTGGCCG AAGCCAGCAT GCCGCGCGTG CTCGCCCCGG GCGACCGCAG CACCGTGACC
CTGGACGTGC AGAACTTCAC CGGCAAGCCG GGCCAGTTCA ACGTGAAGGT GGAAAGCGAA
GGCCCGCTGA ACCTGGGCGA GGGCAGCCGC AGCGTGCAGT TGAATGCTGA TGCCAAGACA
ACGCTGAGTT TCCCGCTGTC GGCGCGTGAG GGCCACAGCG TGGCCAAGGT GCGCGTACGT
GTGGACGGCA ACGGCTTCAA GGCTGATCGC CGCTACGAGC TGCCGGTGCG TGCGGCGTGG
CCGCAGGTGC TGCGTTCGCA GGTGCGCACG CTGGATCCGC TGGCAGCGGT CAGTCTCGAC
AACAGCCTGA CCGATGGCCT GATGTCCGAG TCGGTGAATG CCCGCCTGCT GGTCAGCCCG
CTGCCGCCGA TCCCGTTCGC CAGTGCGCTG CAGGGCGCGC TGAACTACCC GTACGGCTGT
GCCGAGCAGA CCACCAGCAA GGGCTACGCC GCGCTGATCC TGGACCAGGC GACGTCGTCG
ATGCTCGGTG CCGACGGGCT GGATGCCAAG ACCCGCCGCG AGCGCATGGA AGGCGCATTC
GGCCGCCTGG CGTCGATGCA GGTGGCCAAT GGCAACTTCT CGATGTGGGG GGACGACGGC
TATGTGAACC CGTGGCTGAC CCCGTACATC ACCGAGTTCC TGCTCGATGC CAAGGATGCC
GGCTTCGCGG TGCCCGACAA CGTGCTGCAG AAGGCACTGA ACCGTCTCAG CGAGGATCTG
TTGTCCGGTG GCAACCAGTT CTACGGCCAG GACGACCGCG AAAAGCTGAA GTTCGCCAAC
CAGGCGTATT CGGGCTACGT GCTGGCCCGG GTCAACCGTG CGCCGCTGGG TACCCTGCGC
ACGCTGTACG ACAACGAGCG CAGCAAGGCG GTCGGCGGCC TGTCGCTGGT CCATCTGGGC
GTGGCGCTGT CGCTGCAGGG CGATGCCAAG CGCGGTCAGG CCGCGCTGGC CGCGGCCTTC
GCCAAGTCCA GCAGCGAACG CCCGTCGTAC TTCGGCGACT ACGGCAGTGC GATCCGTGAT
GACGCGCTGA TGATCGCGCT GACCCACGAA AACAAGCTGG CCAAGCCCGC GTGGGACGCG
CGTGCGGTGG ATCTCGGCCG TGGCCTGGAT GCGCGCCGCA ATGCCGGCTG GATGTGGCTG
AGCACGCAGG AGCAGGTGGC CATCGCCCGT CTTGGCAAGG CCCTGGCCGC CAACCAGAAG
GCACTGGTGG CCGGTGAACT GGTGATTGGT GGCAACACCG AAGCCATCGG CGAGCGAAAG
CTGTTCGGCC GCAACTTCAG CGCCAGTGAG CTGGCCAGCG GCGTGCGCTT CACCCCGCAG
GGCCAGCCGC CGATGTTCGC CAGCATCGAC GTGGCCGGCA TCCCGCGCAG CGCGCCGGCA
CCGGACAACA GTGTGCTGGG CATTGAGCGC AGCTACTACG GCACCGATGG CAAGCCGTGG
TCGCCGCGTC CGCTGAAGGA AGGCGAAGCC CTGATCGTGC GCGTGACGGT CACCGCCGAC
ACCACGATGC CCGATGCCCT GCTGACCGAC CTGTTGCCGG CGGGTCTGGA GATCGAGAAC
TTCAATCTGG GCGACGCCAA GCAGTGGGCC GATGTGGTGG TTGATGGCAT CACCATCAGC
GACCGCGGTG AAGCCGCCGA CACCAAGCAT GAGGAGTTCC GCGACGACCG CTATGTGGCC
GCGCTGAAGC TCTCGCGTGG CAGCAAGGCC AACGTGTTCT ATCTGGTGCG CGCGGTGACC
CCGGGTACTT ACTCGGTGCC GCCGCCGCTG GTGGAGGACA TGTACCGGCC GCAGCTGCGT
GGCGTCGGCC GCAGCAACCC GACCACGATC ACGGTGGTAC AGCCGTGA
 
Protein sequence
MSGPARRKRW GWAAAVLAGG LLLGLAGCRN DSGQLPKSSG EAITTKAEQV KEFTLLRAYP 
DRKNEGLSLA LEFSRPLVGT QDFDKLVRFE EKVGTDDSSW TLSDDGLTLR YPFVEAGKEF
SLVVSPDLLA ADGSRLGKEL KQKVFSGELK PVVGFASQGS VLPAKDSRGL PVVSVNVPEV
DVEFLRVREK DLPTFFSQYQ RGGRRGSWEL SSDYERSPIN KLAEPVYVNR FILGGKKNER
VLTYLPTQDI KELQEPGLYF ALLKRTGDYE GEFDTAFFSV SDIGLHTRAY KDKLFVHTAG
LKDGAPLKGI DLRVLDAKGE VVLKGSTDGN GNALLNYTLD ATHVLVASTG KDTSFLPFNQ
PALDLSEFAV AGRDNAWFDV YAWSGRDLYR PGETVRLSAL LRDNDGKPVK AQPVFLRLKQ
PDGKTFRETR LQPGEQGYIN FEQVIPAEAP TGRWQVEFRT DPASKEAIQG MTLRIEEFLP
ERMKLDLDSA QKTLKPGEDL RLQANGAYLY GAPADGNRFT ARMAVAAEQQ PVEGLPGYFF
GDPTLQLPRE AKDVIDSTLP GNGQLREDVA LPEEAAKAKA PIAVVLSGSL YETGGRTVTR
TLKRVMWPAN ALVGVRPLFN PEDGADSNGN ARFELMRVDA AGKPQPANGL KITLVRELRD
YHWTFNDNRW DYDFTRRFEN KETRTVDAGS SAVAFDFPVE WGEYRVDVFD PSTGLTSRYP
FRAGWSWGDD NRGLDARPDK VKLGLDKTGY KAGDTLEVTV TPPHAGKGIL MVETDRMLYV
QDIEAKPGST FKIPVTADWE RHDVYITALV FRGGSAPSKI TPARAVGVVH VPMDRKGRTV
AVGLVAPKQM RPEQDLPVTV SAPQLAGKMA HVTVSAVDVG ILNITRFPVP DAGAHFFAQR
RLGIDAYDIY SRVIESFDGG AGKLKFGGDM ALQALPQAKR PTARVQTVDL FSGPVQLDAK
GIARIRLKVP DFNGTLRVSA LVYSDDQYGK RDVETVVRAP ILAEASMPRV LAPGDRSTVT
LDVQNFTGKP GQFNVKVESE GPLNLGEGSR SVQLNADAKT TLSFPLSARE GHSVAKVRVR
VDGNGFKADR RYELPVRAAW PQVLRSQVRT LDPLAAVSLD NSLTDGLMSE SVNARLLVSP
LPPIPFASAL QGALNYPYGC AEQTTSKGYA ALILDQATSS MLGADGLDAK TRRERMEGAF
GRLASMQVAN GNFSMWGDDG YVNPWLTPYI TEFLLDAKDA GFAVPDNVLQ KALNRLSEDL
LSGGNQFYGQ DDREKLKFAN QAYSGYVLAR VNRAPLGTLR TLYDNERSKA VGGLSLVHLG
VALSLQGDAK RGQAALAAAF AKSSSERPSY FGDYGSAIRD DALMIALTHE NKLAKPAWDA
RAVDLGRGLD ARRNAGWMWL STQEQVAIAR LGKALAANQK ALVAGELVIG GNTEAIGERK
LFGRNFSASE LASGVRFTPQ GQPPMFASID VAGIPRSAPA PDNSVLGIER SYYGTDGKPW
SPRPLKEGEA LIVRVTVTAD TTMPDALLTD LLPAGLEIEN FNLGDAKQWA DVVVDGITIS
DRGEAADTKH EEFRDDRYVA ALKLSRGSKA NVFYLVRAVT PGTYSVPPPL VEDMYRPQLR
GVGRSNPTTI TVVQP