Gene Smal_2983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2983 
Symbol 
ID6475800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3322967 
End bp3323830 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID642732178 
ProductPirin domain protein 
Protein accessionYP_002029365 
Protein GI194366755 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.373808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0595027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA TCATCGCCCC GCGCGTGCAC GACATCGGCG GACTCGAAGT CCGTCGCGCC 
GTCCCCACCC TGCAGGCGCG CAGCATCGGC TCGTTCGTGT TCGTCGACCA GATGGGCCCG
GCACTCATGC ATCCCGGCAC CGCCATCGAC GTGCGCCCGC ATCCGCATAT CGGCCTGGCC
ACCGTCACCT ACCTGTGGTC GGGCGCCATC GGCCACCGCG ACACGCTGGG CTCGGACCAG
GTGATCCGCC CCGGTGACGT CAACTGGATG ACCGCTGGCC GCGGCATCGC CCATTCCGAA
CGCACGCCGC AACCAGACCG CGATCACGAC AACCCGATCC ACGGCATGCA GACCTGGGTC
GCACTGCCGA AGTCGCATGA GGAAATCGAG CCGGCGTTCT ACCACCATGC CGCGGCCACC
CTGCCCGAGC AGCGCCGCAA TGGTGTCTGG CTGCGGGTGA TCGCCGGCCG CGCCTATGGC
GAGGAATCGC CGGTGAAGGT GTTCGCCGAC ACCCTCAACG TAGCGATCGA CCTCGACCCG
GATGCGGAGA TCGATATCGA CAATGGCCAC CGCGAGCGCG CGCTGTACAT CCTCGAGGGC
GAGGCGCAGC TGGACGGCGT TGACATCCCC GCCCAGCACC TGGTGATCCC CGAAGCCGGT
GCGACAGGCC GCCTGCGTGC GAAGACGCCG GTGAAGGCGA TGTTGTTCGG TGGCGAGCCA
CTGGATGGCC CACGTCACCT GTGGTGGAAC TTCGTCTCCA GCTCGAAGGA GCGTATCGAG
CAGGCCAAGC ACGACTGGGA AGCCGGCCGC TTCGGCACCA TTCCGGGCGA CGACAAGGAA
TTCATCCCGC TGCCGCAGTA CTGA
 
Protein sequence
MTTIIAPRVH DIGGLEVRRA VPTLQARSIG SFVFVDQMGP ALMHPGTAID VRPHPHIGLA 
TVTYLWSGAI GHRDTLGSDQ VIRPGDVNWM TAGRGIAHSE RTPQPDRDHD NPIHGMQTWV
ALPKSHEEIE PAFYHHAAAT LPEQRRNGVW LRVIAGRAYG EESPVKVFAD TLNVAIDLDP
DAEIDIDNGH RERALYILEG EAQLDGVDIP AQHLVIPEAG ATGRLRAKTP VKAMLFGGEP
LDGPRHLWWN FVSSSKERIE QAKHDWEAGR FGTIPGDDKE FIPLPQY