Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2983 |
Symbol | |
ID | 6475800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3322967 |
End bp | 3323830 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642732178 |
Product | Pirin domain protein |
Protein accession | YP_002029365 |
Protein GI | 194366755 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.373808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0595027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA TCATCGCCCC GCGCGTGCAC GACATCGGCG GACTCGAAGT CCGTCGCGCC GTCCCCACCC TGCAGGCGCG CAGCATCGGC TCGTTCGTGT TCGTCGACCA GATGGGCCCG GCACTCATGC ATCCCGGCAC CGCCATCGAC GTGCGCCCGC ATCCGCATAT CGGCCTGGCC ACCGTCACCT ACCTGTGGTC GGGCGCCATC GGCCACCGCG ACACGCTGGG CTCGGACCAG GTGATCCGCC CCGGTGACGT CAACTGGATG ACCGCTGGCC GCGGCATCGC CCATTCCGAA CGCACGCCGC AACCAGACCG CGATCACGAC AACCCGATCC ACGGCATGCA GACCTGGGTC GCACTGCCGA AGTCGCATGA GGAAATCGAG CCGGCGTTCT ACCACCATGC CGCGGCCACC CTGCCCGAGC AGCGCCGCAA TGGTGTCTGG CTGCGGGTGA TCGCCGGCCG CGCCTATGGC GAGGAATCGC CGGTGAAGGT GTTCGCCGAC ACCCTCAACG TAGCGATCGA CCTCGACCCG GATGCGGAGA TCGATATCGA CAATGGCCAC CGCGAGCGCG CGCTGTACAT CCTCGAGGGC GAGGCGCAGC TGGACGGCGT TGACATCCCC GCCCAGCACC TGGTGATCCC CGAAGCCGGT GCGACAGGCC GCCTGCGTGC GAAGACGCCG GTGAAGGCGA TGTTGTTCGG TGGCGAGCCA CTGGATGGCC CACGTCACCT GTGGTGGAAC TTCGTCTCCA GCTCGAAGGA GCGTATCGAG CAGGCCAAGC ACGACTGGGA AGCCGGCCGC TTCGGCACCA TTCCGGGCGA CGACAAGGAA TTCATCCCGC TGCCGCAGTA CTGA
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Protein sequence | MTTIIAPRVH DIGGLEVRRA VPTLQARSIG SFVFVDQMGP ALMHPGTAID VRPHPHIGLA TVTYLWSGAI GHRDTLGSDQ VIRPGDVNWM TAGRGIAHSE RTPQPDRDHD NPIHGMQTWV ALPKSHEEIE PAFYHHAAAT LPEQRRNGVW LRVIAGRAYG EESPVKVFAD TLNVAIDLDP DAEIDIDNGH RERALYILEG EAQLDGVDIP AQHLVIPEAG ATGRLRAKTP VKAMLFGGEP LDGPRHLWWN FVSSSKERIE QAKHDWEAGR FGTIPGDDKE FIPLPQY
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