| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2981 |
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| Symbol | |
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| ID | 6475798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3319292 |
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| End bp | 3319912 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642732176 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_002029363 |
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| Protein GI | 194366753 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000395274 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.05783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGATG TTGATACACC TCAGGAGCTG GATCTGGAAC TGGTCCGGCG CGTGCAGCAC
GGCGAGAGTG CCGCCTTCGA TGTCCTGGTG CGCAAGTACC AGCATCGGGT CGTGGCCTTG
GTCGGTCGCT ACATCGCCGA CTGGAGCGAA TGTCAGGACG TCGCCCAGGA CACTTTCATC
CGTGCCTACC GCGCGATCGG AAGTTTCCGT GGCGATGCCC AGTTCTCAAC CTGGTTGCAT
CGAATCGCCG TGAATACCGC CAAAAACTAC CTGGCTTCAC ACAATCGCCG CCCGCCGACC
GATGACATCG ACATCGGCGA TGCTGAACAG TTCGACAGCG GGACGCGCCT GCGCGACACC
GACACGCCCG AACGCGAGTT GATGCGCCAG GAGCTGGAAC AGACGGTGAT GAAGGCCGTC
AACGCGCTGC CGGAAGAACT CCGGCTGGCG ATCACCCTGC GCGAGGTGGA AGGCCTGAGT
TACGACGAAA TCGCGCAGAA AATGGGGTGC CCGATCGGCA CCGTGCGTTC ACGGATCTTC
CGGGCGCGCG AGGCGATCGA CACCGAACTC CGGCCGCTGT TGGACATCGG CAGCGCCACC
CGTGAGAAGA GCCGCGTATG A
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| Protein sequence | MADVDTPQEL DLELVRRVQH GESAAFDVLV RKYQHRVVAL VGRYIADWSE CQDVAQDTFI
RAYRAIGSFR GDAQFSTWLH RIAVNTAKNY LASHNRRPPT DDIDIGDAEQ FDSGTRLRDT
DTPERELMRQ ELEQTVMKAV NALPEELRLA ITLREVEGLS YDEIAQKMGC PIGTVRSRIF
RAREAIDTEL RPLLDIGSAT REKSRV
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