| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2978 |
|---|
| Symbol | |
|---|
| ID | 6475795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3314830 |
|---|
| End bp | 3316638 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642732173 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_002029360 |
|---|
| Protein GI | 194366750 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0755515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0112986 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCTG ATTCGATGCG GAACATCCGC AACTTCTCCA TCATCGCCCA CGTCGACCAC
GGCAAGTCCA CGCTGGCCGA CCGCATCATC CAGCTCTGCG GCGGCCTCCA GGCCCGCGAG
ATGGAAGCGC AGGTGCTCGA CTCCAACCCG ATCGAGCGTG AGCGTGGCAT CACCATCAAG
GCGCAGTCGG TGTCGCTGCC GTACCTGGCC AAGGACGGGC AGACCTACCA TCTGAACTTC
ATCGACACCC CGGGCCACGT CGACTTCTCC TATGAAGTCA GCCGCTCGCT GGCCGCCTGC
GAAGGCGCGC TGCTGGTGGT CGACGCCGCC CAGGGCGTGG AAGCGCAGTC GGTGGCCAAC
TGCTACACCG CTGTCGAGCA GGGCCTGGAA GTGGTGCCGG TGATCAACAA GATCGACCTG
CCCACCGCCG ACATCGAGCG CGCCAAGGCC GAGATCGAGG CCGTGATCGG CATCGATGCC
GCCGACGCCG TGCCGGTCAG CGCCAAGACC GGCCTGAACG TGCAGGACGT GCTGGAAGCC
ATCGTGCACC GCATTCCGCC GCCGAAGCCG CGTGACACCG ACAAGCTGCA GGCGCTGATC
ATCGACTCCT GGTTCGACAA TTACCTGGGC GTGGTCTCGC TGGTGCGCGT GATGCAGGGT
GAGATCAAGG CCGGTGACAA GCTGCAGGTG ATGTCCACCG GCCGCAACCA CCAGGTCGAC
AACGTCGGCG TGTTCACCCC GAAGCGCAAG GTGCTGCCGG CGCTGCGCGC CGGTGAAGTG
GGTTGGGTCA CCGCCAGCAT CAAGGACGTG CACGGTGCGC CGGTCGGCGA CACCCTCACC
CTGGCTGCCG ACCCGGCGCC GAAACCGCTG CCGGGCTTCC AGGAAATGCA GCCGCGCGTG
TTCGCCGGCC TGTTCCCGGT CGATGCCGAA GACTACCCGG ACCTGCGCGA AGCGCTGGAC
AAGCTGCGCC TGAACGATGC TGCGCTGCGC TTCGAGCCGG AAAGCTCCGA AGCAATGGGC
TTCGGTTTCC GCTGCGGCTT CCTCGGCATG CTGCACATGG AGATCGTGCA GGAGCGCCTG
GAACGCGAAT ACAACCTGGA CCTGATCAGC ACCGCGCCGA CGGTGGTGTA CGAGGTACTG
AAGACCGACG GCACCATCAT CAACATGGAC AACCCGGCCA AGCTGCCGCC GGTGAACCAT
GTCGAGGAGA TCCGCGAGCC GATCATCCGT GCCAACGTGC TCACCCCCGA GGAGTACATC
GGCAACATCA TCAAGCTGTG CGAAGAAAAG CGTGGCAGCC AGATCGGCAT CAACTACCTG
GGCAGCCAGG TGCAGATCAG CTATGAGCTG CCGATGGCCG AAGTGGTGCT GGACTTCTTC
GACAAGCTGA AGTCGGTCAG CCGTGGCTAT GCGTCGCTGG ACTACCACTT CGTGCGCTTC
GATGCCGGCC CGTTCGTGCG CGTCGACGTA CTGATCAACG GTGACAAGGT CGATGCGCTG
TCGCTGATCG TGCACCGCAG TCACGCCGAT CGCCGCGGCC GCGAGCTGTG CGACAAGATG
AAGGACCTGA TCCCGCGCCA GCAGTTCGAC GTGGCCATCC AGGCTGCCGT CGGCTCGCAG
ATCATCGCCC GTACCACGGT CAAGGCCATG CGCAAGAACG TGCTGGCCAA GTGCTATGGT
GGCGACGTTT CGCGCAAGAA GAAGCTTCTG GAAAAGCAGA AGGAAGGCAA GAAGCGCATG
AAGCAGGTCG GCCGTGTGGA GATCCCGCAG GAAGCGTTCC TGGCCGTGCT GCAGATGGAC
AACAAGTAA
|
|---|
| Protein sequence | MSSDSMRNIR NFSIIAHVDH GKSTLADRII QLCGGLQARE MEAQVLDSNP IERERGITIK
AQSVSLPYLA KDGQTYHLNF IDTPGHVDFS YEVSRSLAAC EGALLVVDAA QGVEAQSVAN
CYTAVEQGLE VVPVINKIDL PTADIERAKA EIEAVIGIDA ADAVPVSAKT GLNVQDVLEA
IVHRIPPPKP RDTDKLQALI IDSWFDNYLG VVSLVRVMQG EIKAGDKLQV MSTGRNHQVD
NVGVFTPKRK VLPALRAGEV GWVTASIKDV HGAPVGDTLT LAADPAPKPL PGFQEMQPRV
FAGLFPVDAE DYPDLREALD KLRLNDAALR FEPESSEAMG FGFRCGFLGM LHMEIVQERL
EREYNLDLIS TAPTVVYEVL KTDGTIINMD NPAKLPPVNH VEEIREPIIR ANVLTPEEYI
GNIIKLCEEK RGSQIGINYL GSQVQISYEL PMAEVVLDFF DKLKSVSRGY ASLDYHFVRF
DAGPFVRVDV LINGDKVDAL SLIVHRSHAD RRGRELCDKM KDLIPRQQFD VAIQAAVGSQ
IIARTTVKAM RKNVLAKCYG GDVSRKKKLL EKQKEGKKRM KQVGRVEIPQ EAFLAVLQMD
NK
|
|---|
| |