Gene Smal_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2945 
Symbol 
ID6475692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3281482 
End bp3282315 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content57% 
IMG OID642732140 
ProductIntegrase catalytic region 
Protein accessionYP_002029327 
Protein GI194366717 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0817746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.460878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGCAGG TTCATACGCT GTCGCTTCTG CTCGAAGCAG CTGAGCTGTC ACGCAGTACG 
TTCTATTACC AGAACCATGT CCTGGCCCAT CCGGATCAGG ACGAGGCACA GCTGTGCGAG
CGCATCCGTG CAATCTACGA TCAAAGCCAA GGGCGCTATG GCTATCGCAC GGTGACGCTG
GAATTAGCCA ATCAGGGCCA TCGGACCAAT CACAAGCGGG TTCAGCGCCT GATGGGGGAG
ATGGGGCTGA AATCGCGGGT GCGTGTGAAG CGCTACCAGG CCTTCAAGGG GGCGGCCAAC
GTTGTGGTTG GCAATGACCT CAATCGCCAG TTCCATGCCG AGCGCCCCAA CCAGAAATGG
GTGACTGACG TGACCGAGTT CAAGGTGCAG GGCATGAAGC TGTACCTGTC GCCGATCATG
GACCTCTACA ACGGCGAAAT CGTGGCTTAT CAGATCAAGC GTCGGCCCGT ATTTGATCTG
GTGGGCCAAA TGCTGGAGGA GGCCATCAAG AAGCTTCCCC CGGATGAGCG CCCCATGATC
CACTCCGACC AGGGCTGGCA GTACCAGCAT GAAAACTACC GGCACATGCT GGAAAAGCAC
TCGTTGAAAC AAAGCATGTC CCGGCGCGGC AACTGCCTGG ACAATGCGGC GATGGAGAGC
TTCTTTGGGA CGCTGAAGTC GGAATTCTTC TACCTGAACA GCTTTGACAG CATCGAGAGT
CTGGAAGCTG GGCTGGTGGA ATACATCCAG TACTACAACG AAGAGCGCAT CAAACTGAAA
CTGAAAGGTC TCAGCCCGAT AAAGTACCGG GAGCAGGCCC AATCGGCCGC CTGA
 
Protein sequence
MRQVHTLSLL LEAAELSRST FYYQNHVLAH PDQDEAQLCE RIRAIYDQSQ GRYGYRTVTL 
ELANQGHRTN HKRVQRLMGE MGLKSRVRVK RYQAFKGAAN VVVGNDLNRQ FHAERPNQKW
VTDVTEFKVQ GMKLYLSPIM DLYNGEIVAY QIKRRPVFDL VGQMLEEAIK KLPPDERPMI
HSDQGWQYQH ENYRHMLEKH SLKQSMSRRG NCLDNAAMES FFGTLKSEFF YLNSFDSIES
LEAGLVEYIQ YYNEERIKLK LKGLSPIKYR EQAQSAA