Gene Smal_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2905 
Symbol 
ID6475651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3242104 
End bp3243525 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content66% 
IMG OID642732099 
Productarginine/ornithine antiporter 
Protein accessionYP_002029287 
Protein GI194366677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGA CATCGCAACG CCTGGGCCTG CCCGCGTTGA TCGCACTGGT GGTCGGCTCG 
ATGGTAGGCG CGGGAATATT TTCATTGCCG CAGAACGTGG CGCGCAGCGC CGGCCCGGCC
GCTGCGCTGA TCGGTTGGGC GCTGAGCGGC GCCGGCATGC TGATGCTGGC CTTCGTGTTC
CAGGCCCTGG CCAACCGCCG CCCGGACCTG GATACCGGCA TCTATGCCTA TGCGCGCGAA
GGCTTCGGCA ACTACATCGG CTTTTCCGCA GCGTGGGGCT ACTGGGTCGC TTCGGTACTG
GGCAATGCCA GCTTCTTCGT ACTGATCTTC AGCGGGCTTG GCCACTTCAT GCCCGTCTTC
GGTGAAGGCA ATACCCCGGC CGCGGTGGCG GCCTCGTCGC TGCTGCTGTG GGCCGTACAC
CTGCTGGTGC TGCGCGGCCT GCGTACTGCC GCCATCGTCA ACGGACTGGT GACGGTGGCC
AAACTGTTGC CGATCGCACT GTTCCTGGTG CTTGCTGCCG GTGCGTTCCG TCTCGACGTG
TTCCGTGCCG ATTTCTTCGG CACGCCTGCA CTCGGCGATC TCGGCCAGCA GCTGCGCGGC
ATGATGCTGG TCACCGTCTG GGTGTTCATC GGCATCGAAG GCGCCAGCAT CTACTCACGT
CGCGCCGCCC GCCGCGCCGA TGTCGGCCGC GCTACGGTGA TCGGCTTCGT GGGTGTGTGG
CTGCTGCTGG TGCTGGTCAG CCTGCTGTCG ATGGGCGTGC TGTCACAGGC GGAACTGGCA
GGCCTGCCCA ATCCTTCGAT GGCCTATGTG CTGCGCGCCA TCGTCGGCGA ATGGGGCGCG
ACGGTGATCA TCGTCGGCTC GATCATTTCC GTGCTGGGTG CGCTGCTGGC CTGGGTGCTG
CTTTGCGCCG AAGTGCTGTA CGCCGCCGCA GGCGATGGCA CGATGCCCGC ATTCCTCGGC
CGCGAAAACG CGCGCGGTGT GCCGGCCAAT GCACTCTGGT TGAGCAACGG GCTGATCCAG
TTGTTCCTGC TGCTGGTGCT GGTCAATTCC GGCAGCTACA CCGGACTGGT GCTGCTGGCC
GCATCGATGA GCCTGGTGCC ATATTTCCTG TCCACCGCGT TCGGTGTGCA GCTGGCCTGG
CGCGGTCACG CCTACGCCGG TCAGCCGGGT GTGCGCTGGC GCGATTTCGC GGTTGCGCTG
CTGGCCAGCG CGTATGCACT GTGGCTGGTA TATGCCGGCG GCCTCGACAA CCTGCTGCTG
TCGGTGCTGC TGTATGTGCC GGGCGTGGTG CTGTTCGCGC TGACCCGGCA CCAGCGCGGC
GATCAGGTAT TCACGCGCTG GGAATGGGTG CTGTTCGCTG CGATCCTGGT TGTGGCGGTT
GCTACGCTGG CGGCGTTCTG GCGAGGAGCA CTGACACTGT AG
 
Protein sequence
MAATSQRLGL PALIALVVGS MVGAGIFSLP QNVARSAGPA AALIGWALSG AGMLMLAFVF 
QALANRRPDL DTGIYAYARE GFGNYIGFSA AWGYWVASVL GNASFFVLIF SGLGHFMPVF
GEGNTPAAVA ASSLLLWAVH LLVLRGLRTA AIVNGLVTVA KLLPIALFLV LAAGAFRLDV
FRADFFGTPA LGDLGQQLRG MMLVTVWVFI GIEGASIYSR RAARRADVGR ATVIGFVGVW
LLLVLVSLLS MGVLSQAELA GLPNPSMAYV LRAIVGEWGA TVIIVGSIIS VLGALLAWVL
LCAEVLYAAA GDGTMPAFLG RENARGVPAN ALWLSNGLIQ LFLLLVLVNS GSYTGLVLLA
ASMSLVPYFL STAFGVQLAW RGHAYAGQPG VRWRDFAVAL LASAYALWLV YAGGLDNLLL
SVLLYVPGVV LFALTRHQRG DQVFTRWEWV LFAAILVVAV ATLAAFWRGA LTL