| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2608 |
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| Symbol | |
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| ID | 6477098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 2910937 |
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| End bp | 2914110 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642731794 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002028991 |
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| Protein GI | 194366381 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.373387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.321065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAT TTTTCATCGA ACATCCAGTC TTCGCCTGGG TGGTTGCGAT CCTGATCTCG
CTCAGCGGCG TGATCGCGAT CCTCAACCTC GGCGTCGAGT CCTATCCCAA CATCGCCCCG
CCGCAGGTGA CCGTCTCGGC CACTTACCCG GGCGCCAGCG CGGATACCAC CGAAAAATCG
GTCACCCAGG TGATCGAGCA GCAGCTGACC GGCATCGATC ACCTGCTGTA CTTCAGCTCC
TCGTCCGCCT CCAACGGCCG CGCCTCGATC ACCCTCACCT TCGAGACCGG TACCGATCCG
GACATCGCCC AGGTGCAGGT GCAGAACAAG GTGTCGCTGG CCACGCCACG CCTGCCTTCG
GAAGTGACCC AGCAGGGCGT GGTGGTGGCC AAGGCCAACG CCGGCTTCCT GATGGTCATC
GCACTGCGTT CCGATACCCC GACCATCAAC CGTGACGCGC TGAACGACAT CGTCGGTTCG
CGCGTGCTCG ACCAGGTCTC GCGTATCCCC GGCGTCGGCA GCACCCAGCA GTTCGGTTCC
GAGTACGCCA TGAACATCTG GCTCAACCCG GAAAAGATGC AGGGCTACGG CCTGTCGGCC
AGCCAGGTGC TGGCCGCGGT ACGCGCGCAG AACGTGCAGT TCGCTGCCGG TGCGCTGGGT
TCGGACCCGT CGCCGGAAGG CCAGCACTTC ACCGCGACCG TCTCGGCCGA GGGCCGCTTC
AGCTCGCCGC AGGAGTTCGA GGACATCATC CTGCGGGCCA ATCCTGACGG CTCGCGCGTG
CTGCTGAAGG ACATTGCGCG CGTGGCCTTC GGCGCCAACA ACTACGGCTT CGATACCCAG
TACAACGGCA AGCCGACCGG CGCCTTCGCG ATCCAGCTGC TGCCGGGCGC CAACGCCCTG
AACGTGGCCG ATGCGGTGCG CGCCAAGATG GACGAGCTGC AGCCCAGCTT CCCGTCCGGC
GTGACCTGGT TCTCGCCGTA CGACAGCACC ACCTTCGTCA AGATCTCGAT CCAGGAAGTG
GTCAAGACCC TGTTCGAAGC GGTGTTGCTG GTGTTCCTGG TGATGCTGAT CTTCCTGCAG
AACTTCCGCG CCACGCTGAT CCCGACCCTG GTCATCCCGG TGGCCCTGCT CGGTACCTTC
CTGGGCATGT GGATGATCGG CTTCACGATC AACCAGCTGA CCCTGTTCGC GATGGTGCTG
GCGATCGGCA TCGTGGTCGA TGACGCGATC GTGGTGATCG AGAACGTCGA GCGCATCATG
ACCGAGGAAG GCCTGGCGCC GAAGCCGGCC ACGCAGAAGG CGATGACCCA GATCACCGGC
GCGGTGGTGG CGATCACCGT CGTGCTGGCG GCGGTGTTCA TCCCGTCAGC CCTGCAGGGC
GGCGCCGCCG GTGAAATCTA CAAGCAGTTC GCGCTGACCA TCGCCATCTC GATGGCGTTC
TCGGCATTCC TGGCGCTGGG CTTCACCCCG GCGCTGTGCG CGACGTTCCT CAAGCCGACG
CACAACGACA ACCCGAACAT CATCTACCGC ACCTTCAACA AGTACTACGA CAAGATCAGC
CACACCTATG TGGGCCACAT CACCTCGGCG GTGCGCCACG CCCCGCGCTG GATGATCCTG
TTCGTGGTGC TGACCGCGCT GTGCGGCTTC CTGTTCACCC GCATGCCGGG CAGCTTCCTG
CCCGAAGAAG ACCAGGGCTA TGCGCTGGCG ATCGTGCAGC TGCCGCCGGG CTCGACCAAG
GGCCAGACCA ACGAAGTGTT CGCGCAGATG CGTGGCGTGC TGGAAAAGCA GGATGGCTAT
GAAGGCATGC TGCAGGTGGC CGGCTTCAGC TTCGTCGGTT CCGGCGAGAA CGTGGGCATG
GGCTTCATCC GCCTGAAGCC GTGGGAGGAA CGCAAGTTCA CCGCGCCGGA GTTCATCCAG
AACATGAACG GCGCGTTCTA CGGCATCAAG GAAGCGCAGA TCTTCGTGGT CAACCTGCCC
ACCGTGCAGG GTCTGGGCCA GTTCGGCGGC TTCGACATGT GGCTGCAGGA CCGCAGCGGT
GCCGGCTACG AACAGCTGAC CCAGGCGCGC AACATCCTGC TCGGCCAGGC CGCGCAGAAG
CCGGACCATC TGGTCGGCGT GCGCCCGAAC GGCCTGGAAA ACGCCCCGCA GCTGCAGCTG
CATGTCGACC GTGTGCAGGC ACAGTCGATG GGCATGTCGG TGTCGGACGT GTACAGCACC
ATCCAGCTGA TGCTGGCCCC GGTGTACGTC AACGACTTCT TCTACGAAGG CCGCATCAAG
CGCGTGACCA TGCAGGCCGA TGGCCCGTAC CGCACCGGCC AGGAGTCGCT GAAGAGCTTC
TACAGCCCGT CCAGCCTGGT CAAGAACGCC GATGGCACCA ACTCGATGAT CCCGCTCAAC
ACGGTGGTCA AGTCCGAGTG GGTCTCGGCA CCACCGTCGC TGAGCCGCTA CAACGGCTAC
TCGGCGATCA ACATCGTCGG CTCGCAGGCC CCGGGCACCA GCTCGGGTGA GGCAATGCAG
ACCATGGAGG CAATCGTCGC CGACGACCTG CCGGCCGGCT TCGGCTATGA CTGGTCGGGC
ATGTCCTACC AGGAAATCCT GGCCGGCAAT GCCGCGACCC TGCTGCTGGT GCTGTCCATC
GTGGTGGTGT TCCTGTGCCT GGCCGCGCTG TATGAAAGCT GGTCGATCCC GGTAGCGGTG
CTGCTGGTGG TTCCGCTGGG CGTGCTCGGT GCACTGGCGC TGTCGATGAT GCGTGGCCTG
CCCAACGATC TGTTCTTCAA GATCGGCCTG ATCACCGTGA TCGGCCTGGC CGCGAAGAAC
GCGATCCTGA TCGTCGAGTT CGCGGTGGAG CAGCGTGCCG CAGGCAAGAA CCTGCGCGAT
GCGACCATCG AGGCCGCCCG CCTGCGCTTC CGCCCGATCC TGATGACCTC GTTCGCGTTC
ATCATGGGCG TGATCCCGAT GGCGATCTCC AGTGGCGCCG GCGCCAACTC CCGCCACGCC
ATCGGCACCG GTGTGATCGG CGGCATGTTG TTCGCCACCC TGCTCGGCCT GCTGATGATC
CCGGTGTTCT TCGTGGTCGT GCGCCGCATG CTGGGCGACA AGCTGGATGA ACCCTCCAAG
GAGTTCATGG AACGCCAGCG CGACGCGGAA ACCGCACACC GCCCGGATCG TTGA
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| Protein sequence | MPKFFIEHPV FAWVVAILIS LSGVIAILNL GVESYPNIAP PQVTVSATYP GASADTTEKS
VTQVIEQQLT GIDHLLYFSS SSASNGRASI TLTFETGTDP DIAQVQVQNK VSLATPRLPS
EVTQQGVVVA KANAGFLMVI ALRSDTPTIN RDALNDIVGS RVLDQVSRIP GVGSTQQFGS
EYAMNIWLNP EKMQGYGLSA SQVLAAVRAQ NVQFAAGALG SDPSPEGQHF TATVSAEGRF
SSPQEFEDII LRANPDGSRV LLKDIARVAF GANNYGFDTQ YNGKPTGAFA IQLLPGANAL
NVADAVRAKM DELQPSFPSG VTWFSPYDST TFVKISIQEV VKTLFEAVLL VFLVMLIFLQ
NFRATLIPTL VIPVALLGTF LGMWMIGFTI NQLTLFAMVL AIGIVVDDAI VVIENVERIM
TEEGLAPKPA TQKAMTQITG AVVAITVVLA AVFIPSALQG GAAGEIYKQF ALTIAISMAF
SAFLALGFTP ALCATFLKPT HNDNPNIIYR TFNKYYDKIS HTYVGHITSA VRHAPRWMIL
FVVLTALCGF LFTRMPGSFL PEEDQGYALA IVQLPPGSTK GQTNEVFAQM RGVLEKQDGY
EGMLQVAGFS FVGSGENVGM GFIRLKPWEE RKFTAPEFIQ NMNGAFYGIK EAQIFVVNLP
TVQGLGQFGG FDMWLQDRSG AGYEQLTQAR NILLGQAAQK PDHLVGVRPN GLENAPQLQL
HVDRVQAQSM GMSVSDVYST IQLMLAPVYV NDFFYEGRIK RVTMQADGPY RTGQESLKSF
YSPSSLVKNA DGTNSMIPLN TVVKSEWVSA PPSLSRYNGY SAINIVGSQA PGTSSGEAMQ
TMEAIVADDL PAGFGYDWSG MSYQEILAGN AATLLLVLSI VVVFLCLAAL YESWSIPVAV
LLVVPLGVLG ALALSMMRGL PNDLFFKIGL ITVIGLAAKN AILIVEFAVE QRAAGKNLRD
ATIEAARLRF RPILMTSFAF IMGVIPMAIS SGAGANSRHA IGTGVIGGML FATLLGLLMI
PVFFVVVRRM LGDKLDEPSK EFMERQRDAE TAHRPDR
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