Gene Smal_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2502 
Symbol 
ID6476991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2808485 
End bp2809747 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content63% 
IMG OID642731688 
Productphage portal protein, HK97 family 
Protein accessionYP_002028886 
Protein GI194366276 
COG category[S] Function unknown 
COG ID[COG4695] Phage-related protein 
TIGRFAM ID[TIGR01537] phage portal protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.160981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGT TCAACGAAGA AGATATCAAG TCGCTGGACC GGCTCTGGAA TCCACCACCG 
GCGGCGCCAC CAGGTGCACG CGCTGAGGCT GGCCAGTTCA CGGGGATGAA TGACCCAGCA
CTGCTGGAGT TCATCCGATC ACAGGGCGGC CACGGCGGTG GTGGCTACCA GTTGCGCAAT
ATGGCAGTGC TCCGGTGCCT TTCCCTGATC TGCGGGACCA TCGGCATGCT GCCGCTGAAC
CTGGTTGAGT CGGGCGGGAA GAAGCGGATA GCCACCGAGC ATCCCGCGCA TCGCCTGCTG
AAGATCAAGC CAAACCCATG GCAGACGCCG TTGGAGTTCA AGCGGCAGAT GGAGCTGGCC
CGGCAGCGGC ATGGCGATGG TTACGCGAGG ATCGTGTGGT CCGCCGGCCG GCCAATCCAC
CTCATCCCGA TGGATTCCCT CGCAGTTCGA GCTGAGCTTG GCGACGACTG GCGGATGATC
TACAGGTACA ACAGCAAGAA GCGCGGCGAG GTGATCCTCA AGCAGGAGGA AGTGCTGCAC
ATCCGCGACC TGTCCGTGGA CGGCGTGACG AGCCTGTCCA GGATGAAGCT GGCAGATCGG
GCTATTCGCC TGGCGCTGGA TGCGGAACAG GCAGCAAGCC GGATCTTTGA GACCGGCAAC
ATGGCCGGCG GCGCCATTGA GGTGCCAAAT GCGCTCAGCG ACGTGGCCTA CGAGCGCATG
CGCACGTCTC TCGACACCGA ATATGCCGGC GCCGCTGCGG CACAGCGCTG GATGCTGCTG
GAGGAGAACG CCAAGGCCAA CAAGTTCGGC AGCACCGCCC AAGAGGCCCA GCACGTCGAG
AACCGAAGCG CACAGGTGGA GGAGGTGGCC AGGCTCTACG GCGTCCCCCG ACCGCTTCTG
TTCCTGAGCG ATACCAGCTG GGGCACCGGC ATCGAGCAGC TGGGCATCTT CTTCCTGCAG
TACACGATGT TGGAGCACTT CACCAACTGG GAGCAGGCGG TCGCGCGATC GCTGATCGAT
GAGCGGGACC TGGAGCGCTA CCAGCCGAAG TTCAACGTGC GGGCGCTGAT GCGCGGCACG
CTCAAGGATC AAGCCGAGTT CTTCAAGGCG GCTCTGGGTG CGGGCGGTAC GAAGCCGTTC
CACACGCAGA ACGAGGTCCG CGACCTGCTG GATTACCCCG AATCGGATCA GCCCGGGGCC
AACGACCTGA TCAACCCCAT GACAGAGAAG GGAAAGAGCA ATGAGCCTCC GGCAGCTGCC
TGA
 
Protein sequence
MSRFNEEDIK SLDRLWNPPP AAPPGARAEA GQFTGMNDPA LLEFIRSQGG HGGGGYQLRN 
MAVLRCLSLI CGTIGMLPLN LVESGGKKRI ATEHPAHRLL KIKPNPWQTP LEFKRQMELA
RQRHGDGYAR IVWSAGRPIH LIPMDSLAVR AELGDDWRMI YRYNSKKRGE VILKQEEVLH
IRDLSVDGVT SLSRMKLADR AIRLALDAEQ AASRIFETGN MAGGAIEVPN ALSDVAYERM
RTSLDTEYAG AAAAQRWMLL EENAKANKFG STAQEAQHVE NRSAQVEEVA RLYGVPRPLL
FLSDTSWGTG IEQLGIFFLQ YTMLEHFTNW EQAVARSLID ERDLERYQPK FNVRALMRGT
LKDQAEFFKA ALGAGGTKPF HTQNEVRDLL DYPESDQPGA NDLINPMTEK GKSNEPPAAA