Gene Smal_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2461 
Symbol 
ID6476951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2763442 
End bp2765583 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content64% 
IMG OID642731649 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_002028847 
Protein GI194366237 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4774] Outer membrane receptor for monomeric catechols 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCTC TCCTGCTCCA CAAACGCGCG CTGTACCTGG CACTGACCCT GCCCTTTGCA 
CCCCTTGCCC TTGCCTCCGA GACCTCAACG ACCATTCCCA AGGAGCTGGA CAGGGTGGAA
GTCCGCGGCC GTGCGCAGGC GCTGTACCGG GTGGACGACG CTGCGGTTGG CACCCGCACC
GATACGCCAC TCGAGTTGGT TCCACAGTCG ATCCAGGTGA TCCCGCGCGA GCTGATCGAC
GATCAGGCCG CGCGTCAGGT GACCGATCTC TATCGCAGCA TCAGCGGCAT CAGCTATTTC
AGCTATGCCG GCGTGACCCT GCGCGGCTTC CGCCAGGAAA ACGTGCTGTA TGACGGCCTG
CGCGGCGACC CGTACGCGGG CTTCTCGGTA CCACAGCTGT TCAACATCGA ACGCGTGGAA
GTGCTGAAGG GGCCGGCCGG CGCACTCTAC GGTGGTGGCG ACGCCGGCGG CGTCATCAAC
TACGTCACGC GCAAGCCCAG GGCGGCCACT GAGCGCCGCA TCGAAGTGCA GATGGGCAAC
CGGGATTTCC GCGCTGGCTC GATCGAAGGC ACGGGTCCAT TGAATGCCGC TGGCAGCGTG
CGCTATCGCG CCGGCCTGTA TGCCGACACC GAGCAGGGCG TGCGCTGGAA CACCGACAGC
GAAAGCGTGA TCGGCGACGC CTCGCTGGCC TTCGATGTCG GCCGGACCGG CGAGCTGGTG
CTGCAGTTCA CCGACGTCAC CCAGAACCTC GGCGGCAACC GCCTGCGCGG CGTGCCGGTG
AATGATGCGG GCACCTTCCT GACCGATCGC CACTGGAACC ACAACGAGGC CAGCGACTTC
CTCGACATGC GCGCCAAAGT GGCGCTGGCG CAGTACCGCT TCGCACCGCG CGACAATCTG
GATCTCGATT TTGCCGCTCG CTGGTTCAGC AACAACGAGC ACCAGATGTA CCACGAGCCG
ATGGGCCTGA TCGATCGTGA CCGCGATGGC GTGGCCGAGT GGATGACCCG CCAGCTGCGC
AACCAGATCC GCGACAACGA AGCATTCACT GCCAACGGTA ATGCAGTCTG GCGGGTGACC
ACCGGCACCG TCGAGCACAA GGTGTTGTTC GGTGCGGACG TGTATCAGCT GGATGCGGAT
TTCACTGCAC AGACCGCCAG CAGCGCCGAC CTTGCACGTG GTGCGGGGCC GGTGCGCGGC
ATCGACCTGT TCAATCCCGT GTACGGCGCC AGTACCTGGC ACGACTACAA CCTGGCGGCC
CTGCCCTGGC GCAGCACGTC CACCCGCAGC AAGCGCTATG GCGGCTACCT GCAGGACGAA
CTGGCACTGG GCACACGCTG GCATGTGCTG GCCGGGTTGC GCTGGGATGG CTTCAAGGAC
GACGACCGCA TTGCCGGCAG CAGCGTGGAT GGCAACGACC TCAGCTGGCG GCTGGGCAGC
ACGTTCACCG TGCGCGAGGG CCTGAATGTC TATGCCAATG TGGCCAGCGG CTTCGTACCG
CAGAGTGCTA CCAACCAGAA CCCCGCCGCT GGCGGGCCGT TCGATGCAGA ACGCAGCAAG
CAGTGGGAAG TGGGCATGAA GTCCCTGCTG GCCGACCGTG TGACCTTGAA CATGGCCGCC
TACCGGATCG ACCGCAGCAA TATCGTGCAG GCAACCGGCG AAGTGATCGG TGGCGTGAAC
CAGTTGGCCG CGCTGGGCCT GGTGCGCAGT ACGGGCATGG AACTGGACCT GCTGGCCGAC
GTGACCGATC GCTGGGTGCT GAACCTGACC TACGCCTACA ACGATGCGCG GGTGAAGGAC
GCAGGCCCGA ATGGCATCAC CAACGCTTCC GGCGACCGAT TCGCCAATGC GCCGCGCAAC
AAGCTGGGTC TGTGGACGCG CTACGACCTG CCGTCGATCA ATTCGGCCAT CGGCTTTGGT
GCTGACCATG TGGGTGAGCG CGTCAGTCTG GACGGGCAGA CGGTGAAGGC TTACACCGTG
TTCGACATGA GCTGGAAGAC CACATGGAAG CAGTGGCAGT TCCAGGCCAA CGTCAAGAAC
CTGTTCGACA AGGTATATGC AGCCAGCAGT TTCATCGCGC GCAACGGGCA TTTCCCGGGT
GAGCCGCGGC GGGTGTACGT GCAGGCCGCT TACAGCTTCT GA
 
Protein sequence
MPPLLLHKRA LYLALTLPFA PLALASETST TIPKELDRVE VRGRAQALYR VDDAAVGTRT 
DTPLELVPQS IQVIPRELID DQAARQVTDL YRSISGISYF SYAGVTLRGF RQENVLYDGL
RGDPYAGFSV PQLFNIERVE VLKGPAGALY GGGDAGGVIN YVTRKPRAAT ERRIEVQMGN
RDFRAGSIEG TGPLNAAGSV RYRAGLYADT EQGVRWNTDS ESVIGDASLA FDVGRTGELV
LQFTDVTQNL GGNRLRGVPV NDAGTFLTDR HWNHNEASDF LDMRAKVALA QYRFAPRDNL
DLDFAARWFS NNEHQMYHEP MGLIDRDRDG VAEWMTRQLR NQIRDNEAFT ANGNAVWRVT
TGTVEHKVLF GADVYQLDAD FTAQTASSAD LARGAGPVRG IDLFNPVYGA STWHDYNLAA
LPWRSTSTRS KRYGGYLQDE LALGTRWHVL AGLRWDGFKD DDRIAGSSVD GNDLSWRLGS
TFTVREGLNV YANVASGFVP QSATNQNPAA GGPFDAERSK QWEVGMKSLL ADRVTLNMAA
YRIDRSNIVQ ATGEVIGGVN QLAALGLVRS TGMELDLLAD VTDRWVLNLT YAYNDARVKD
AGPNGITNAS GDRFANAPRN KLGLWTRYDL PSINSAIGFG ADHVGERVSL DGQTVKAYTV
FDMSWKTTWK QWQFQANVKN LFDKVYAASS FIARNGHFPG EPRRVYVQAA YSF