Gene Smal_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2253 
Symbol 
ID6476666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2530471 
End bp2532432 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content67% 
IMG OID642731434 
ProductFusaric acid resistance protein conserved region 
Protein accessionYP_002028639 
Protein GI194366029 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCC CCACCCCATT TCGCCCCAAC GTGCGCCAGG CATTTGCACG GTTGAAGAGC 
CCCGCCCTCA GGACCGACCA AGAGGCGGTG CTGTTCTCGC TCAAATGCCT GCTCGCCGCG
TCGCTGGGGC TGTATGTCTC TCTAAGGATC GGCCTGAATC GCCCGTTCTG GGTGATCGGC
ACGGTCTATC TGGTGTCGCA GCCCCTTTCC GGGGCGACGC TCAGCCGCGG CCTGTTCCGC
CTGCTCGGTA CCGTGGGCGG GGCCATCGCC ACCGTCGCGC TGGTGCCACG CTTCGCCAAT
GCGCCCCTGG TGCTGAGCGC CGCGCTGGCC ACGTGGATGG CGCTGTGCCT GTATCTGGCG
ATGCTCGACC GCACGCCACG TGCGTACGCG TTCCTGCTGG CCGGCTATAC CACCAGCCTG
ATCGGGTTTC CTGCGGTGAT GGTGCCGGGA GACGTGTTCA CCATCGCCAT CACGCGGGTG
CAGGAAATCT CCATCGGCAT CCTGGCCGCC ACCCTGGTAC ATGCGTTGGT GCTGCCGCGC
CGGGTCTCGA TGCGCGTGCA CGCGCGGGTT GCCGCCGTGC TGGATGATGC GGAACGATGG
ACACGCGACA TGCGCGCCGG TGCATCGGAC ACGGTGCTGG CGTCGGACCG CTCGAAAGTG
GCAGCCGACC TGCTCGAGCT GCATGTACTG TCGATCCACC TGCCCTTCGA CAGCGCCCAT
GGCGTGGCCC AGGTGCAGAT CCTGCGTGCC CTGCATGACC GGATGCTGGA CGTACTGATG
CTCTCCAGCG CGGTGGAAGA TTCCCTCGCC CGGCTGCGCT CACCCCAGGC CAGCGCGATG
GATGCAACAG GCTGGCGCGA TCTGCTGCAG GCCGGCCTCG CCGCGCAACA GGCCGAACTC
GACCTCGCCC ACGCCGACTG CCGCGTGCTG CAGGCGCAAC TGCACACTGC CCGCCCCGAC
TGGCACCGGC ATGTACCTGC TCGCCTTGCG CGACATGCGC AGGGTGCGGT ACTTCACCGG
GATCATCGGC TTGCCCTGCG CAGCGCGCTG GGCGCGTTCG TCGGCATCCT GCTGAGCTGC
GTGCTGTGGA TCATTACTGG CTGGTCGGAG GGCGCCACGG CGGTGTCCAT CATCGGCACT
GCATGCGTCC TGTTCGGCAC CCTCGAAGCG CCGGCACCGC ATGTCATGCG CTATCTGCTG
GGGTCGTTGA TTGGCGTTGC CGTCGGCCTG CTCTACGGTC TGCTGATCTT CCCCGCGCTG
TCCGATTTCG TCGGCCTGAT TGCCGCGCTC GCGCCTGCGC TGCTGCTGTG CGGATCGTTC
CTGGCCCGGC CATCCTTCAT CATGGCTGCG CTGGGCGTGG TGCTGACGTT TCCGCTCATC
GCGGGACTGG GCGCGACCAA TACGGTCAAC ATCGTCGGCG CACTCAACAA CAGCGTTGCA
TTGTTCGTCG GTACGGCAAT GGCACTGTGC AGCATGCAGT TGTTCCAGAC CGCCGATGCG
GGCCGCAACC GCGCACGGCT GGAGCGTTCG ATCCGTCGGG ACATCGCACG ACACGCCGCC
GGACAAGGTG ATATGACCCG CGCCTGGCTC AGCCGCATGC TGGATCGAAT CGGGCTGCTC
GCTCCCAGGT TGCAGGGCCG TTCCAACGCA GCACACGACC TGCGAGCGTT GTTTGCGGAC
GTTCGTGCGG CACGTGCATC CAGCCAATTC CGCACACTGA ACAAGTGCCT GGACGACCCG
CACGTTCGGG CGCTTCACGC GGCGCTGATC GAACGCGTCA CCGCACATTT CAGGATTCGC
GCCCACTCAC CACGCAGTGT CGACGCCCAT CTTCTGGAAC TGGTGGACCG CGTGCGCGAG
GCAGCGGCAG CCAGCGCCGA GGCCGATCAA GGGTATCTGC TGCACCTGCT CTGCGGGTTG
CGCCGCGACC TGCTGGTCCC CCCGCTCGCC CATCGACACT GA
 
Protein sequence
MHAPTPFRPN VRQAFARLKS PALRTDQEAV LFSLKCLLAA SLGLYVSLRI GLNRPFWVIG 
TVYLVSQPLS GATLSRGLFR LLGTVGGAIA TVALVPRFAN APLVLSAALA TWMALCLYLA
MLDRTPRAYA FLLAGYTTSL IGFPAVMVPG DVFTIAITRV QEISIGILAA TLVHALVLPR
RVSMRVHARV AAVLDDAERW TRDMRAGASD TVLASDRSKV AADLLELHVL SIHLPFDSAH
GVAQVQILRA LHDRMLDVLM LSSAVEDSLA RLRSPQASAM DATGWRDLLQ AGLAAQQAEL
DLAHADCRVL QAQLHTARPD WHRHVPARLA RHAQGAVLHR DHRLALRSAL GAFVGILLSC
VLWIITGWSE GATAVSIIGT ACVLFGTLEA PAPHVMRYLL GSLIGVAVGL LYGLLIFPAL
SDFVGLIAAL APALLLCGSF LARPSFIMAA LGVVLTFPLI AGLGATNTVN IVGALNNSVA
LFVGTAMALC SMQLFQTADA GRNRARLERS IRRDIARHAA GQGDMTRAWL SRMLDRIGLL
APRLQGRSNA AHDLRALFAD VRAARASSQF RTLNKCLDDP HVRALHAALI ERVTAHFRIR
AHSPRSVDAH LLELVDRVRE AAAASAEADQ GYLLHLLCGL RRDLLVPPLA HRH