Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2209 |
Symbol | |
ID | 6476540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2484998 |
End bp | 2486197 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642731391 |
Product | general secretion pathway protein F |
Protein accession | YP_002028596 |
Protein GI | 194365986 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.616736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGT TCGACTACCA GGCTGCCAAC GCGCAGGGCC GCATCGAGAA GGGTCAGCTG GACGCCGACA GCCCGCGCGG CGCACGCCAG CTGCTGCGCG GTCGCGGGCT GACACCCGTG CAGGTCAGCG CGGCGCGCGG TGCGGGCAGT GGCTGGGGCG CCCGCCGGCT GTCTGCCAGC GAGCTGGCCT GGGCCACGCG CCAGCTGGCC AGCCTGCTGG CCGCGAGCCT GCCGTTGGAA GCCGCATTGA CTGCGGTGAT CGAACAGGCC GAGCGCCCGC ATGTGGCCCA GGCACTCACC GCCGTACGCG CCGACGTGCG TGCCGGCCAG CGCCTGACCG TTGCGCTGGC CGCGCGGCCG CGCGATTTCC CGCCGATCTA TCGGGCGCTG GTGGGCGCAG GTGAAGACTC CGGTGACCTG GCGCGGGTGA TGGAGCGCCT TGCCGACTAC ATCGAAGAAC GCAACGCGCT GCAGGCCAAA GTACTGACCG CCTTCATCTA CCCAGCGGCG ATCAGCCTGG TGTCGGTGGC GATCGTGATC TTCCTGCTCA GCTACGTAGT GCCGCAGGTG GTGACCGCGT TCGTGCAGGC GCGGCAGACG CTGCCGATGC TGACCCAGGT GATGCTGGCC GCCAGCGCGT TCGTGCGCAG CTGGGGCGTG TGGGCAGGGC TCGGCATCGC TGCGTTGGTG GTGGCATGGC GGTTGGCCCT GCGCAAGCCC GAGCTGCGCC TGCGGTGGGA CGCGATGCTG CTGCGGGTGC CGATGGTCGG GCGTTTCGTG CTGGGGGTGA ACAGTGCGCG CTTTGCCTCG ACGCTGGCGA TCCTGCTGGA TGCCGGTGTG CCACTGCTGC GTGCCTTGGA GGCGGCGCGG CAGACGCTTG GCAATGCGCT GCTGGCGCGC TGTGCCGATG ATGTGTCCGC GCGCGTGCGC GAAGGTGCGG CGTTGGGTGC TGCGTTGAAG GTGCAGAAGG TGTATCCGCC TATCCTGGTG CACCTGGTGG CCAGCGGTGA GAAGACCGGC TCGCTGGCAC CGCTGCTGGA TCGTGCTGCA CAGACGATCT CGCGCGAGAT CGAACGTCGC GCGATGGCAC TGACCGCGCT GCTGGAACCG ACCATGATCC TGGTGATGGG CGGTGTGGTG CTGACGATCG TGCTGGCCGT GCTGATGCCG ATCATGGAAA TGAATCAATT GGTGCAGTGA
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Protein sequence | MALFDYQAAN AQGRIEKGQL DADSPRGARQ LLRGRGLTPV QVSAARGAGS GWGARRLSAS ELAWATRQLA SLLAASLPLE AALTAVIEQA ERPHVAQALT AVRADVRAGQ RLTVALAARP RDFPPIYRAL VGAGEDSGDL ARVMERLADY IEERNALQAK VLTAFIYPAA ISLVSVAIVI FLLSYVVPQV VTAFVQARQT LPMLTQVMLA ASAFVRSWGV WAGLGIAALV VAWRLALRKP ELRLRWDAML LRVPMVGRFV LGVNSARFAS TLAILLDAGV PLLRALEAAR QTLGNALLAR CADDVSARVR EGAALGAALK VQKVYPPILV HLVASGEKTG SLAPLLDRAA QTISREIERR AMALTALLEP TMILVMGGVV LTIVLAVLMP IMEMNQLVQ
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