Gene Smal_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2165 
Symbol 
ID6476496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2425751 
End bp2426449 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID642731347 
Producttwo component heavy metal response transcriptional regulator, winged helix family 
Protein accessionYP_002028552 
Protein GI194365942 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.77286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TGATCGTCGA AGACGAACCC AAGACCGGCA ACTACCTGCG CCAGGGCCTG 
ATCGAGGCCG GCTATGTGGT CGACCTCGCC AGCAACGGCA TCGACGGCCT GCATCTGGCC
GAGAGTGGCG AGTACCAGCT GGTCATCCTC GATGTGATGC TGCCCGGCCT GGATGGCTGG
ACCGTGCTGT CGCGGCTGCG TGGAGCCGGC TGGCCGCTGC CGGTGCTGTT CCTGACCGCG
CGCAGCAGCA TCGCCGACCG CGTGCAGGGC CTGGAGCTGG GCGCCGATGA CTACCTGGCC
AAGCCCTTCG CTTTCGCCGA GCTGCTGGCG CGCGTGCGCA CGCTGCTGCG CCGCGGCCAG
GCGGTGCCGC AGGTTGAACG CATCGTCATT GCCGACCTGG TGGTGGATAC CCAGCGCCGC
CGGGTGGAGC GTGGCGGCCA GCGCATCGCG CTCAGCCAGA AGGAGTACAC CCTGCTGGAG
CTGCTGGCAC GCCGCCGTGG CGAAGTGCTG CCGCGCTCGC TGATCGCCTC GCAGGTGTGG
GACATGAACT TCGACAGCGA CACCAATGTC ATCGATGTGG CGATCCGCCG CCTGCGCGCC
AAGATCGACG ATGATTTCGC CGACAAGCTG ATCATTACCG TGCGCGGCAT GGGCTATGTA
CTGGAGGCGC CGGACGACGG CGCCGCGCGC AACGGATGA
 
Protein sequence
MKLLIVEDEP KTGNYLRQGL IEAGYVVDLA SNGIDGLHLA ESGEYQLVIL DVMLPGLDGW 
TVLSRLRGAG WPLPVLFLTA RSSIADRVQG LELGADDYLA KPFAFAELLA RVRTLLRRGQ
AVPQVERIVI ADLVVDTQRR RVERGGQRIA LSQKEYTLLE LLARRRGEVL PRSLIASQVW
DMNFDSDTNV IDVAIRRLRA KIDDDFADKL IITVRGMGYV LEAPDDGAAR NG