| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2145 |
|---|
| Symbol | |
|---|
| ID | 6476405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2404216 |
|---|
| End bp | 2406645 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642731327 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002028532 |
|---|
| Protein GI | 194365922 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.085277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC CTGTTCCGCC CGCCGCGCTG CGCCGGCTGG CCCCCACCCT GCTCGCAGCC
TGCCTGTGTG CGGCGCTGCC CGCCACCGCG CAGACCGCTG CGTCCGCACC CGTCGAACTG
CACCTGCCGG CCGGCCCGCT GCAGGCTTCG CTCACGACAC TGGCGCGGCA GAGTGGCATC
CAGCTGCTGT TCGCGGCCGA CAGCGTGAGC GGCCGCAACG CGCCCGCACT CGACGGCCGC
TACACCCCGC ACGACGCCCT GCAGCGCCTG CTGGCCGGGC AAGGCCTGGC GATGCAGGAG
CGCTCGCCGG GGGTGTTCGT GGTGAATGCC GCGCCGGCAT CGCCCAAGCC CCGCGCTCCG
GCCCGGGCCG CGTCATCGGC AGCGTCCCCG GCCACGACCA CTTCGCTGGC CCGCGTCACG
GTATCGGCCT CGACCGCGCG CATGCCGCAG GGTGAGACTG CGATGCCCAA CACCATCACC
GTGCTGACCC GCGAGGACAT CGCGCAGCAG CTGGCGCTGG GCTCGGACGT CTCGCGCGTG
CTGTCGGCGC AGATCCCGGC GTTTGCCCCG GCGCGCGAGA AGATGTCCAA CTACGGCGAA
ACCATGCGTG GCCGCGGCAT CCTGTACATG GTCGACGGCG TGCCGCAGTC GACGCCGCTG
CGCGATGGCT CACGTGATTC GCACACCATC GATCCGGCGA TGATCGAACG CATCGAGGTC
ATCCACGGCG CCAACGCACT GCAGGGCATC GGCGGTACCG GTGGCATCGT CAACATCATC
ACCCGCAGCG CGCCCAGCGA GCCGGGCGCC TTCCTGCTCG ATACCAACAT CAGCTACAGC
TCGGCGCTGC CCAGCCGCCG TGATGACAAC GGCCAGCGCG GCTCGGCACT GGTCGGCGTG
CGCGGCGAGC AGTTCGATCT GGTGGCCGGC CTGGCCTATG AGAAGCAGGG CCTGTACCAC
GACGGCGAGG GCCGTTCGAT CGGTACCAAC GCCCAGGGCG AACTGATGGA TTCGACCTCG
TCGAACGTGT TCGCCAAGCT GGGCTGGAAC ATTGCCGAGG GCCACCGCCT GCAGCTGATG
GCCAACCGCT ACGAGCTGCG CGGGCTGGAC AACTACCTGG CGGTGAACGG TGATTACCGC
ACCGGTCGCC CAACCATTTC GGTGCCCGGC GATACCCCGC TGGAGCCGCC GATGAACCGC
TCGCGTTCGT TGACGCTGGA CTACAGCGCC GCCGACCTGC TCGGTGGCCG CTTCCAGGCG
CAGGCCTTCG CGGTGGACTT CGAAGGCCGT TATGGCGCCA GCCAGTGGGA TCCGTGGGGC
AACACCGGCG CCAACGCCGC CTGGGACCAG ACCCAGAACG AATCGGACAA GCGCGGCTTC
AAGCTGACCC AGAGCTGGGC CCGCATCGCC GACACCACGC TGGACGTGAC CCTGGGCCTG
GACGGCCTGC GCGATCGCAC CCACCAGGTG CTGCTGGCCA GCGGCATGAA CTGGGTACCG
CAGACCACCT ATCAAAGCCT GTCGCCGCTG CTGCAGCTGC ACTGGTGGCC GACCGACCAT
CTGATGCTGT CCGGCGGCCT GCGCTACGAA AAGGGCGAGC TGGAAGTAGG CGACTACACC
ACCCTACCCC GCTACGGCGC ACGCAAGGTG GCTGGCGGCA AGCCGACCAT GAGCGAGACC
CTGCCCAACT TCGGCGCGGT CTGGTACATC AACGATCGCC TCAACGCCTA CGCCTCGTAT
TCGGAAGGCT ACACCGTGGC CGACGTCGGC CGCGTGCTGC GTGCGATCAA CCGCGACGGC
CAGCGCGTGG ACAATCTGAT TGATCTGTCA CCGGTGGTGT CGGACAACCG CGAGATCGGC
CTGGAGTACG ACGATGGCCG GTTCAGTGGT GACATCGCCT ATTACACCTC TGAATCCAAG
CTGGGCTCGG TGCTGATCTA CGACCCGGGC ATCGACGCCT ATGCGGTGCA GCGCCAGGCC
ACCCGCGTGG AAGGCTTCGA AAGCAACCTG CGCCTGCACC TGGGCGACAG CCGGCTGGGC
CTGGGTTATG CGCGCGCCAA CGGCCGCTAC GACGCCAACG TCGACGGCCG CCTCGACAGC
GACCTGGCTG GTGTGAACAT CGCGCCGAAC CGGCTGACCG CGTTCTGGGA GCAGAGCTGG
ACGCCGCAGC TGAGCACCCG CCTGCAGGCC AGCCACGCCT TCGACCGCGA CTTCGACCTG
CGTGGCGCGC GGGTGGCAGA GTTCAAGGGC TACACCACGC TGGACCTGGT GGCTCGCTAC
GTACTGGACA AGCACAGCTT CACCCTGGGC GTGCAGAACC TGGCGAACAA GCAGTACATC
AGCTACTACT CGCAGACCAC GCCGTCGAAC CCGAGCTATT TCTCGGGCCG TGGCCGGGTG
CTGACGCTGG GGTGGCAGTA CCGGTACTGA
|
|---|
| Protein sequence | MTRPVPPAAL RRLAPTLLAA CLCAALPATA QTAASAPVEL HLPAGPLQAS LTTLARQSGI
QLLFAADSVS GRNAPALDGR YTPHDALQRL LAGQGLAMQE RSPGVFVVNA APASPKPRAP
ARAASSAASP ATTTSLARVT VSASTARMPQ GETAMPNTIT VLTREDIAQQ LALGSDVSRV
LSAQIPAFAP AREKMSNYGE TMRGRGILYM VDGVPQSTPL RDGSRDSHTI DPAMIERIEV
IHGANALQGI GGTGGIVNII TRSAPSEPGA FLLDTNISYS SALPSRRDDN GQRGSALVGV
RGEQFDLVAG LAYEKQGLYH DGEGRSIGTN AQGELMDSTS SNVFAKLGWN IAEGHRLQLM
ANRYELRGLD NYLAVNGDYR TGRPTISVPG DTPLEPPMNR SRSLTLDYSA ADLLGGRFQA
QAFAVDFEGR YGASQWDPWG NTGANAAWDQ TQNESDKRGF KLTQSWARIA DTTLDVTLGL
DGLRDRTHQV LLASGMNWVP QTTYQSLSPL LQLHWWPTDH LMLSGGLRYE KGELEVGDYT
TLPRYGARKV AGGKPTMSET LPNFGAVWYI NDRLNAYASY SEGYTVADVG RVLRAINRDG
QRVDNLIDLS PVVSDNREIG LEYDDGRFSG DIAYYTSESK LGSVLIYDPG IDAYAVQRQA
TRVEGFESNL RLHLGDSRLG LGYARANGRY DANVDGRLDS DLAGVNIAPN RLTAFWEQSW
TPQLSTRLQA SHAFDRDFDL RGARVAEFKG YTTLDLVARY VLDKHSFTLG VQNLANKQYI
SYYSQTTPSN PSYFSGRGRV LTLGWQYRY
|
|---|
| |