| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2105 |
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| Symbol | |
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| ID | 6476365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2358230 |
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| End bp | 2359723 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642731287 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_002028492 |
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| Protein GI | 194365882 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.619214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0553697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGGC AAGTCAGTGA GATGCTGCAG CGCGCTTATC GGCCCTATCC GTCGCTGCCC
GAACTGCTGG GCGCATTCGT GAAGGAGCTG GCCCAGCACA AGGCGATGCG TGGTGGCGAG
GTGCAGCTGC ATGGCGACAT GGCAGGCATG GCAGCGGGAA TGCCGCTGCC GGCCAAGGAC
GCCGAGCGCG GTCGATCACA CCGGGTGCCC ATCCGTTATG CCGGCGAGGT ACTGGGCGAG
CTGCATCTTG AAGGGGAGTG CGGCCCGCTG GACGGCAGTG CACTGGTGCT GGGGGAGCAG
TTTGCACAGC GCTGCGCGCA CCTGATCAAG CGCTACGAAG CCAAGGCATG GGCCGAGCAG
GCACTGCGCA GGCCGCTGCT GCTGGTGGGG GCGGGTGAAG CACTGAAGCA GATCGAGGAG
TTCATTGAAC GCGCCGCGGC CAGTCGACTG CCGGTGCTGC TGCGCGGGGA GTTCGGTACC
GAGAAGATGG AACTGGCTGC GGCGCTGCAT AGCGGCGGCC ACGCCAGGCA GGGGCCGTTC
GTTGAAGTGA ACTGTGCGCA TCCTGCGGGC GAACCCGACG ATTGGTTCGC GCATGCCCAG
GGCGGCACGC TGTACTTCCA CGAAGTGGAC GAGCTGCCGG CGATCCTGCA GGGGCAGCTG
TCGCATCGAA TCCGCGGCCT GCATGCCACA CGCTCCGAAG CGGAGGCGAT CCGGCCGATA
CGGGTCATCG CTTCGACCAG TGCGGACCTG GAACAACGGG TGCGCGAGAA GCAGTTTTCA
CGGGCGCTGC TGGCCGGGCT GGAGTTCCTC ATCGTGGACA TTCCGCCGCT GCGGGAGCGG
GTCGAGGACA TCGGTGCACT GGCCGCACGT GCGCTGGAGC TGCACGGTTT CGATCCGCAT
GTGCTCAGTG AAGACGTCCT GCTGGCGCTG TGCGCGCATG ACTGGCCGGG CAACCTGCTG
GAGATGGAAC GGGTGGTGGT ACGCCTGGCG GTGATGACCG GCGGCCGCTG CATCCGTCGT
GAGGACCTGC TGCGCCATGC GCCGGGGCTG GCCGCTGCCA GCACGGACCA TGTCCATGAA
CGTGGTGCAT CACAGGCACC ATTGCCGGAG CACGACATCG CACTGGACCC CGACGTGCTG
GATCCACCCC GCCTGTCGCA CGAAGGCCTG CATGACGGGC TGAAGCGCGC CTTGGCGTAT
CTGAAGGATC ATGCCGCCGA ACCGGTCACC CTGGGTGACC TGGCCCGCCA GGCGCATGTC
AGCCAGTCAC ACCTCGGCTT CCTGTTCCGC AGCGAACTGG GGACCACCTT CAAGCTGCTG
CTGCAGCAGC TGCGCATCGA GCACGCCAAG CAACTGCTGC GCGGCGGGCA ACGACTGCGC
ATCACCGATG TTGCGCTGCA GGTCGGTTTC GGCGACCTGA GTCATTTCGA GAAGAGCTTC
CGCCGCGCGG TGGGCGTGAG CCCGCGCAGC TATCGTCGTA CTCCGGAGCA ATGA
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| Protein sequence | MHRQVSEMLQ RAYRPYPSLP ELLGAFVKEL AQHKAMRGGE VQLHGDMAGM AAGMPLPAKD
AERGRSHRVP IRYAGEVLGE LHLEGECGPL DGSALVLGEQ FAQRCAHLIK RYEAKAWAEQ
ALRRPLLLVG AGEALKQIEE FIERAAASRL PVLLRGEFGT EKMELAAALH SGGHARQGPF
VEVNCAHPAG EPDDWFAHAQ GGTLYFHEVD ELPAILQGQL SHRIRGLHAT RSEAEAIRPI
RVIASTSADL EQRVREKQFS RALLAGLEFL IVDIPPLRER VEDIGALAAR ALELHGFDPH
VLSEDVLLAL CAHDWPGNLL EMERVVVRLA VMTGGRCIRR EDLLRHAPGL AAASTDHVHE
RGASQAPLPE HDIALDPDVL DPPRLSHEGL HDGLKRALAY LKDHAAEPVT LGDLARQAHV
SQSHLGFLFR SELGTTFKLL LQQLRIEHAK QLLRGGQRLR ITDVALQVGF GDLSHFEKSF
RRAVGVSPRS YRRTPEQ
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