Gene Smal_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1969 
Symbol 
ID6476076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2210785 
End bp2211633 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID642731151 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002028356 
Protein GI194365746 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0909841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.074502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACC GCGAGCACCC TGCCCCCGAC GACCTCCGCC GTCACGTCCA GTGCATCTGG 
TGGCTGCAGG ACGACGCACC CGGGAATGAC GTGCAGGTCA TCTATCCCGA TGGCCGCTGC
GAGCTGCTGG CAGAGCTTGG CATACCCTTG CAGCTGCATG GCGCAGATGG CCGTATCCGT
TCCGATCTAC CGTTCTGTTT CGCGGCACAG CAGTCAGGGC CAATCCGTTT GCAGGCCGCT
GGTGCGGTGT TCTGCATCGG CGTGCGGCTG CAGCCGGCCG CGAGCGCCTT GATCGCCGGT
GCCCGCTTGC CCGGCCTTCG TGACCAGGCT CCGGACCTGT ACACGCTGGA TGCTTCCTTT
GCCGAGACGT TCAGTGCAGC CGCACGCGCC AGCGCGGCTG CCAGCACGCC CGAGCCCCTC
TGGCAGGTCC TGCGGGATCG TTGTGCCAGC TTCGTCCTGG ACGAACGCGT CGAACAGGCC
GTTGCGCAGC TGGATTCAAT GGAGGGCGAT CTGCGCATCG CCGAACTGGC GCGACGGCTT
GGCATGTCCC TGCGCGGCCT GCAATCCCGC TTTCTGGCCG CGGTGGGCAT GCCCCCGAAG
GAGTACGCCC GTGTGTGCCG TCTGCAGGCG ATTCTGCAAA CCCTGGATGG AGAAGCCACC
AGCATTGCCA CTGCAGCCGC ACGCCATGGC TACAGCGACC AGGCCCATGC CACGCATGAC
CTTGTCCGCT GGACCGGGGT CACGCCCGGC CGGCTGGCGA ATGCCCTGCG TGGCGATCGT
GGCAGCGACG ATGCACTGCG GTTGGCTGCC GCCTTCGTGC GCGGAAGCAG TAGCGGTCAC
TCACGATAG
 
Protein sequence
MDYREHPAPD DLRRHVQCIW WLQDDAPGND VQVIYPDGRC ELLAELGIPL QLHGADGRIR 
SDLPFCFAAQ QSGPIRLQAA GAVFCIGVRL QPAASALIAG ARLPGLRDQA PDLYTLDASF
AETFSAAARA SAAASTPEPL WQVLRDRCAS FVLDERVEQA VAQLDSMEGD LRIAELARRL
GMSLRGLQSR FLAAVGMPPK EYARVCRLQA ILQTLDGEAT SIATAAARHG YSDQAHATHD
LVRWTGVTPG RLANALRGDR GSDDALRLAA AFVRGSSSGH SR