Gene Smal_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1955 
Symbol 
ID6476062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2197937 
End bp2198704 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID642731137 
Productprotein of unknown function DUF1365 
Protein accessionYP_002028342 
Protein GI194365732 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.116158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCA GCGCACTCTA TATCGGGCAG GTGATGCATC GGCGCCATCA CCCGCATCCG 
CACGCCTTCC GCTATCCGGT CGCACAGCTG CTGCTGGATC TGGATGAGCT GGAGACCGTG
TTCGCACGAC GCTGGCTGTG GTCGGTCAAC CGGCGCAACC TGGCCGAGTT CCGCCGCAGC
GACTACTTCG GCGATCCCGC GCAACCGCTC GCCGATGCCG TGCGCGACCA CGCCGCGAAC
ACCCTCGGCC ACCGCCCCTG CGGGCCCGTG CGCCTGCTCA CCCACCTGCG CTTTGCCGGC
CACGTGTTCA ACCCGGTCAG CTTCTACTAC TGCTACCAGG CTGACGGCAG CACGCTGGAC
TGCATCGTCG CCGACATCAC CAATACCCCA TGGAAGGAAC GCCACGCATA CGTGCTGCCG
GTATCGACCG CGCTCCATGA GGGCGCGTCA CTGCGCTGGC AGTTCGACAA GTGCTTCCAC
GTCTCGCCAT TCATGGCAAT GGATTGCCGC TATGACTGGC GGTTCAACGC ACCCGACGAG
GACCTGCGCG TGCACATGCA GGTGTGGCGC GACGGCGTGC GCCAATTCGA TGCCACCCAG
TCCATGCAGC GGCACCCGCT GGACGGACGT GGCCTTGCGC GCGTCCTCGC CTGCTATCCG
TTGATGACCA CCCAGGTGGT GGCCGCCATC CATTGGCATG CGCTGCGCCT GTGGCTGAAG
CGCAACCCGG TGCACGACCA CCCTTCCCTT GCCGAGAAAC CACGATGA
 
Protein sequence
MSASALYIGQ VMHRRHHPHP HAFRYPVAQL LLDLDELETV FARRWLWSVN RRNLAEFRRS 
DYFGDPAQPL ADAVRDHAAN TLGHRPCGPV RLLTHLRFAG HVFNPVSFYY CYQADGSTLD
CIVADITNTP WKERHAYVLP VSTALHEGAS LRWQFDKCFH VSPFMAMDCR YDWRFNAPDE
DLRVHMQVWR DGVRQFDATQ SMQRHPLDGR GLARVLACYP LMTTQVVAAI HWHALRLWLK
RNPVHDHPSL AEKPR