| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1935 |
|---|
| Symbol | lolA |
|---|
| ID | 6476042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2177003 |
|---|
| End bp | 2177641 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642731117 |
|---|
| Product | outer-membrane lipoprotein carrier protein |
|---|
| Protein accession | YP_002028322 |
|---|
| Protein GI | 194365712 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.765114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.707119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCC GCCTCCGCCG TTTCCTTGCC ACCACCACCT TGGCCGTGGC CTGCGCCGCT
GCCGGCAGCG CCTGGGCTGG CGCCCGCGAT GACCTGAAGA CCTTCACCAG CGGCCTGAAG
GGCCTGGACG GGCAGTTCAG TCAGCAGGTG TTCGACAGCC GCGGCAAGGT GAAGGAGTCG
ACCAGCGGCC GCGTGGCTCT TTCGGCGCCG CGCCTGTTCC GCTGGGAGTA CGTGCGCCCG
CACGAACAGT TGATCGTGGC CGACGGCAAG AAGGTCTGGA TGTACGAGCC GGACCTGGAG
CAGGCCACCG TACGCGAGCA GGGCAAGGAA GAGCAGAACA GCCCGCTGAC CGCGCTGATC
AACCCGGCGC TGCTGGAACA GCAGTACGAC CTCAGCGAAG AAGCCGCACA GCGTGATGGC
CTGCAGTGGC TGTCGCTGTC GCCGAAGCGC GATACCGAAG CCAGCTTCCA GTATGCCGCG
CTGGGCTTCA ACGCCCAGGG CCTGGCCAAG ATGGAAATCA CTGATGCCGT CGGCCAGCGC
ACCGTGATCA GCTTCAGCGG CTGGAAGCGC AACCCGGGCT TTGCTGCCGG CACCTTCAGC
TTCACCCCGC CGAAGGGCAC TGACGTCATC GGTAATTGA
|
|---|
| Protein sequence | MNFRLRRFLA TTTLAVACAA AGSAWAGARD DLKTFTSGLK GLDGQFSQQV FDSRGKVKES
TSGRVALSAP RLFRWEYVRP HEQLIVADGK KVWMYEPDLE QATVREQGKE EQNSPLTALI
NPALLEQQYD LSEEAAQRDG LQWLSLSPKR DTEASFQYAA LGFNAQGLAK MEITDAVGQR
TVISFSGWKR NPGFAAGTFS FTPPKGTDVI GN
|
|---|
| |