Gene Smal_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1873 
SymbolfliM 
ID6475898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2111184 
End bp2112188 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID642731055 
Productflagellar motor switch protein FliM 
Protein accessionYP_002028260 
Protein GI194365650 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.424816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.31491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATC TGCTGTCCCA GGACGAGATC GATGCCCTGC TCCACGGCGT GGACAATGGT 
GCAGTCGAGA CCGATGCGGA ACCGCCTACG GGCGAAGCAC GTTCGTACGA CTTCGCAAGC
CAGGACCGGA TCATCCGCGG TCGCATGCCG ACCCTGGAAA TGGTCCACGA GCGCTTCGCG
CGCCTGTGGC GGATCGGCCT GTTCAACCTG ATCCGGCGCT CGGCCGAGCT GTCGGTGCGC
GGCATCGAAC TGATCAAGTT CAACGACTAC ATGCACTCGC TGTATGTGCC GACCAACCTG
AACCTGATCC GCTTCAAGCC GCTGCGTGGC ACCGGCCTGA TCGTGTTCGA GCCGACCCTG
GTGTTCGCCA TCGTCGACAA CTTCTTCGGC GGCGACGGGC GCTACCCGAC CCGTATCGAA
GGCCGCGAGT TCACCGCCAC CGAAATGCGG GTGATCCACC TGCTGCTGAA GCAGACCTTC
GCCGACCTGC GCGAGGCCTG GGCACCGGTG ATGGATGTCG ACTTCGAGTA CATCAACTCG
GAGATCAACC CACACTTCGC CAACATCGTG ACGCCGCGCG AGTACGTGGT GGTGTGCCGC
CTGCATGTCG AGCTCGACGG CGGTGGTGGC GACATCCACG TCACCCTGCC GTATTCGATG
CTGGAGCCGA TCCGCGAGCT GCTCGACGCT GGCATCCAGA GCGACCGCAA CGACCGCGAC
GAGAGCTGGG GCCAGACCCT GCGCGAACAG CTCAACATCG CCGAGGTGAC CCTGTCCAGC
GTACTGGCCA GCAAGCGCAT GACCCTGCGT GACCTGACCC AGCTGAAGGT CGGCGACATC
CTGCCGATCG AGCTCAGCCC GCAGGTGCCG CTGTGCGTGG AGAACATCCC GGTGTTCACC
GGCGAGTTCG GCATCGCCAA CGGCATGAAC GCCGTGAAGA TCACCGCTAC CCATCCGCCG
GGCACCCGCC CGCGCGCACC CGTCATCCAG GAAGACCCGC AATGA
 
Protein sequence
MNDLLSQDEI DALLHGVDNG AVETDAEPPT GEARSYDFAS QDRIIRGRMP TLEMVHERFA 
RLWRIGLFNL IRRSAELSVR GIELIKFNDY MHSLYVPTNL NLIRFKPLRG TGLIVFEPTL
VFAIVDNFFG GDGRYPTRIE GREFTATEMR VIHLLLKQTF ADLREAWAPV MDVDFEYINS
EINPHFANIV TPREYVVVCR LHVELDGGGG DIHVTLPYSM LEPIRELLDA GIQSDRNDRD
ESWGQTLREQ LNIAEVTLSS VLASKRMTLR DLTQLKVGDI LPIELSPQVP LCVENIPVFT
GEFGIANGMN AVKITATHPP GTRPRAPVIQ EDPQ