| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1862 |
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| Symbol | |
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| ID | 6475887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2099459 |
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| End bp | 2100202 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642731044 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_002028249 |
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| Protein GI | 194365639 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.347265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGGCG CAGCCCAGTA CAGGGAAGTG CAGCGCTCGG CGGCGAACGA AGTCATCGCC
CAGCATTCGG ACCTGGTGCG GCGCATCGCC CACCACCTGG CCGCGCGCCT GCCAGCCAGC
GTCGAGGTCG ACGACCTGAT CCAGGCCGGA ATGATGGGCC TGATCGAAGC CTCGCGCAGC
TACGACGCGG ACCAGGGCGC CTCGTTCGAG ACCTACGCGT CGATCCGCAT CCGCGGCTCG
ATGATCGACG AGATCCGCCG TGGCGACTGG GTGCCCCGCT CGGTGCACCG CCGCGCTCGT
GATGCCGCCG CCACCATCCG CCGCCTGGAG CAGAGCAGCG GCCGCGCCGC CAGTGCCACC
GAAGTGGCCG CGGCGATGGA AATGCCGCTG CCCGAATACC TGAGGCTGAT GGAAGACGCC
GCACGTGGCC AGGTGCTGAG CCTGGAGTCG CGCATCGAAG ACCAGGGCGA GCTGGACACG
GTCACCCAGG GTGGCCCGAC CCCGCAGCAG GTGCTGGAGC GCGGCGAGTT CGGCCGCGAG
CTGGGCAAGG CGATCGGCCA CCTGCCCGAG CGCGAGCAGC TGGTGCTGTC GCTCTACTAC
GAGCAGGAGC TGAACCTGAA GGAGATCGGC GCGGTGCTTG GCGTGAGTGA ATCGCGGGTC
TGCCAGATCC ACGGCCAGGC AGTGCTGCGC CTGCGTGGTC GACTGAAGAA TTTCGAGGCG
GCGGACGCCG GCCTGGAAGA ATGA
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| Protein sequence | MKGAAQYREV QRSAANEVIA QHSDLVRRIA HHLAARLPAS VEVDDLIQAG MMGLIEASRS
YDADQGASFE TYASIRIRGS MIDEIRRGDW VPRSVHRRAR DAAATIRRLE QSSGRAASAT
EVAAAMEMPL PEYLRLMEDA ARGQVLSLES RIEDQGELDT VTQGGPTPQQ VLERGEFGRE
LGKAIGHLPE REQLVLSLYY EQELNLKEIG AVLGVSESRV CQIHGQAVLR LRGRLKNFEA
ADAGLEE
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