| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1844 |
|---|
| Symbol | |
|---|
| ID | 6475869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2077829 |
|---|
| End bp | 2078425 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642731026 |
|---|
| Product | chemoreceptor glutamine deamidase CheD |
|---|
| Protein accession | YP_002028231 |
|---|
| Protein GI | 194365621 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.494723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT CGCTGCGTAC CGATGATGTG ATGCGTTACC AGGACGCGCG CTTCAAGACC
ATTGCGGCCA AGCTGCTGCC GACCCAGTAC CTGGTGGTCG ACGACACCAC CGCGCTGACC
ACTACACTCG GCTCCTGCGT GGCCGCCTGC CTGCGCGACC CGGTGCTGAA GATCGGCGGC
ATGAACCACT TCCTGCTGCC CGAAGGCAAC GCCGGCGATG GCGCACCCGC GCGCTACGGC
AGCTACGCGA TGGAACTGCT GATCAACGAC ATGCTCAAGC GCGGCGCGCA CCGCAAGCGC
ATCGAGGCCA AGGTGTTCGG CGGCGCCAAC GTGCTCAAGG GGTTCACCAG CAATCCGGTC
GGCACCCGCA ACGCCGAGTT CGTGCGCCAG TACCTGCAGG CCGAGCACAT TCCGATCATC
GCCGAGGACC TGTGCGGCAT CCATCCGCGC AAGATCTGGT TCTTCGCCGA TACCGGCCGC
GTGGTGGTGC AGCGCCTGCC GCACGCACAC GAAGCCGAAG TGGCCGCGAC CGAATCGGCC
GTGCGTGCAC GCCTGTCCAA GGCCCCGGTC ACCGGCGGCG TGGAGCTGTT CGAATGA
|
|---|
| Protein sequence | MNASLRTDDV MRYQDARFKT IAAKLLPTQY LVVDDTTALT TTLGSCVAAC LRDPVLKIGG
MNHFLLPEGN AGDGAPARYG SYAMELLIND MLKRGAHRKR IEAKVFGGAN VLKGFTSNPV
GTRNAEFVRQ YLQAEHIPII AEDLCGIHPR KIWFFADTGR VVVQRLPHAH EAEVAATESA
VRARLSKAPV TGGVELFE
|
|---|
| |