Gene Smal_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1788 
Symbol 
ID6475741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2008642 
End bp2010030 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content67% 
IMG OID642730970 
ProductFAD linked oxidase domain protein 
Protein accessionYP_002028175 
Protein GI194365565 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.300075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CCCGCATTGC CTCGCTGCAG CAGGCCTGTC CCGGCCTGAA GCTGAAGACC 
GACCCGGCCG ACCTGGAGCA TTACGGGCGC GACTGGACCC GGCGCTGGAC GCCGGCGCCG
CTGGCGATCG CGCTGCCGGC CACGGTCGAG GAAGTACAGG CGGTGATGCG CTGGAGCGCA
CGCGAGGGCG TGGCGGTGGT GCCGTCGGGC GGCCGCACCG GCCTCTCGGG TGGCGCGGTG
GCCGCCGACG GCGAGCTGGT GCTCAGCCTG GAACGGATGA ACAAGGCGCT GGCCTACGAC
GCGGTCGATC GCACCCTGGT GGTGCAGGCC GGCATGCCGC TGGAAGCCGT GCACAACGCC
GCGCTGGACC ACGGCCTGAT CTACCCGGTG GATTTCGCCG CGCGCGGCTC GTGCACGATC
GGGGGCAACA TCGCCACCAA TGCCGGTGGC ATCCGCGTGA TCCGCTACGG CAACACCCGC
GAGTGGATCG CCGGGCTGAA AGTGGTTACT GCCAGCGGCG AGCTGCTTGA ACTCAACAAG
GGCCTGATCA AGAACTCCAG CGGCTACGAC TTCCGCCAGC TGCTGATCGG CTCGGAAGGT
ACGCTGGGCG TGATCGTCGA GGCGACGGTG AAACTGACCG ACCCGCCGCC GGCCAGCAAC
GTGATGCTGC TGGCGCTGCC CAGTTTCGAT GTGCTGATGC AGGTATTCGC CGCGTTCCGC
GCGCGCCTGC AGCTGCAGGC CTTCGAGTTC TTCACCGACC GGGCACTGGA GCACGTGCTG
GCACATGGCG CACAGGCGCC GTTCGACGAA GTGCACCCGT ATTACGTGGT GACCGAGTTC
GCGGCCGGCG ACGAGGCCCA GGAAGCGGCG GCGATGGCCG CGTTCGAGGA CTGCATGGGC
AATGGCTGGG TCAGCGATGG CGTGATCAGT GCCAGCGACG CGCAGGCCGC GCAGCTGTGG
CGCCTGCGCG AGGGCATCAC CGAATCGCTG GCGCGCTATA AACCCTACAA GAACGACGTT
TCAGTGCGGA TCTCGTCGAT GCCGGCGTTC CTGGCCGAGA CCCAGGCGCT GATCGGGCAG
GCCTACCCGC ATTTCGATGT GGTGTGGTTC GGCCATATCG GCGACGGCAA CCTGCACATC
AACGTGCTCA AGCCGGACGA CACCAGTGAC GCTGATTTCG TGGCGCAATG CGAGCACGTA
ACCAAGCTGC TGGCGCAGGT GCTGGCCCGC TTCGACGGCA GCATCTCGGC CGAGCACGGC
ATCGGTCTGG TCAAGAAGGG CTACCTGGAC AGCACCCGCG GCCCGGCCGA GATCGCCCTG
ATGAAGGCGG TCAAACGCGC GTTCGATCCC CAAGCGCGGC TGAATCCCGG CAAGCTGTTC
GACGTTTGA
 
Protein sequence
MTDSRIASLQ QACPGLKLKT DPADLEHYGR DWTRRWTPAP LAIALPATVE EVQAVMRWSA 
REGVAVVPSG GRTGLSGGAV AADGELVLSL ERMNKALAYD AVDRTLVVQA GMPLEAVHNA
ALDHGLIYPV DFAARGSCTI GGNIATNAGG IRVIRYGNTR EWIAGLKVVT ASGELLELNK
GLIKNSSGYD FRQLLIGSEG TLGVIVEATV KLTDPPPASN VMLLALPSFD VLMQVFAAFR
ARLQLQAFEF FTDRALEHVL AHGAQAPFDE VHPYYVVTEF AAGDEAQEAA AMAAFEDCMG
NGWVSDGVIS ASDAQAAQLW RLREGITESL ARYKPYKNDV SVRISSMPAF LAETQALIGQ
AYPHFDVVWF GHIGDGNLHI NVLKPDDTSD ADFVAQCEHV TKLLAQVLAR FDGSISAEHG
IGLVKKGYLD STRGPAEIAL MKAVKRAFDP QARLNPGKLF DV