Gene Smal_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1642 
Symbol 
ID6475512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1851340 
End bp1852377 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID642730824 
ProductAgmatine deiminase 
Protein accessionYP_002028030 
Protein GI194365420 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2957] Peptidylarginine deiminase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.638362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA CCCTTCGTTT TCCTGCCGAA TGGGAAGCCC AGAGCGGCAT CCTGATTGCC 
TGGCCCACCG CCGACACCGA CTGGGCCGAC CGCCTGGGCC AGGTGGAAGA GACCTACATC
GCGCTGGTCG CGGCCATCAC CCGCTTCCAG CCGGTGCTGA TCTGCGTGGC CGACGACGAT
GTGGAGACCT ATGCCGAAAT GCGGCTGCGC TCCAACCGCA TCGACATGGA CAAGGTCCAC
TTCACCACGG CGGCCTACGA CGATACCTGG CTGCGCGACT CCGGCCCGAT CACCCTGCGC
CGCGCCGATG GCGGCTTCCA GCTGCTGGAC TTCCGCTTCA CCGGCTGGGG CGGCAAGTTC
GATGCCACCC TGGATGACCA GTTGGTGGGC GTGCTCGACC AGGCCGGCGT GTTCAACGAC
GCACCGGTGC GCAGCATCCC GTTCGCGCTG GAAGGCGGCG GCATCGAGAC CGACGGTGAA
GGCACCCTGC TGACCACCTG GAAGTGCCTG CACGAGCGCC ACCCGGACCG CGACCGGGCA
AGCCTGACCG CCGACCTGGC CGGCTGGCTG CAGCAGGACC GCGTGCTGTG GCTGGACCAC
GGTTACCTGG AAGGCGACGA CACCGACGCC CACATCGACA CCCTCGCCCG CTTCGCCTCG
GCCGACAGCA TCGTCTACCA GGCCTGCGAC GACGAAAGCG ACTCGCATTA CGCCGAGCTG
CAGGCGATGG GCAACGAGCT GGCCGCACTG CGTACCAAGG ATGGGCAGCC GTACCGCTTG
TTCCCGCTGC CGTGGGCACA GCCGGTGATC GACGAAGGCC GCCGCCTGGC TGCGTCGTAC
GCCAACTACC TGATCGTCAA CGGCGCGGTG CTGATGCCGG CCTACGGCGA TCCGGCTGAC
GACCTGGCCC GCGATGTACT GGCGCAGGCG CACCCGGGCC GCGAGATCGT GCAGGTGCCG
TGCCGCTCGC TGATCTGGCA GAACGGCAGC CTGCACTGCA TCACCATGCA GCTGCCGGAA
GGCCTGTTGA AGGCATAA
 
Protein sequence
MNQTLRFPAE WEAQSGILIA WPTADTDWAD RLGQVEETYI ALVAAITRFQ PVLICVADDD 
VETYAEMRLR SNRIDMDKVH FTTAAYDDTW LRDSGPITLR RADGGFQLLD FRFTGWGGKF
DATLDDQLVG VLDQAGVFND APVRSIPFAL EGGGIETDGE GTLLTTWKCL HERHPDRDRA
SLTADLAGWL QQDRVLWLDH GYLEGDDTDA HIDTLARFAS ADSIVYQACD DESDSHYAEL
QAMGNELAAL RTKDGQPYRL FPLPWAQPVI DEGRRLAASY ANYLIVNGAV LMPAYGDPAD
DLARDVLAQA HPGREIVQVP CRSLIWQNGS LHCITMQLPE GLLKA