Gene Smal_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1630 
Symbol 
ID6475500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1833796 
End bp1834875 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content70% 
IMG OID642730812 
Producthypothetical protein 
Protein accessionYP_002028018 
Protein GI194365408 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.464978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.369724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CCGCTCTCTC CTCCTGGTCC CTGCCCGCCC TGCGTCAACG CTGGCAGCCA 
CGCCTGCCCG GCCTGCTGCT GGTGGGCCTG ATCGCGGCGG CGTCGCTGTA CCTGGCCGAG
CTGCCCTGGC TGCAGGCGCA CGGTCTGAGC GCGCTGACCG TGGCCATCGT CGCCGGCATC
GTGGTCGGCA ACACCCTCTA CCCGCGGCTG GCGCCGAGCA GCGCGGCCGG CGTGGGCTTC
TCCAAGCACT GGCTGCTGCG CGCCGGCATC GTGCTGTATG GCCTGCGCCT GACCTTCCAG
GACATCGGCC ATGTCGGCGT CACCGGCGTG CTGATGGACG TGCTGGTGGT CGCCAGCACC
TTCGGCCTGG CCTGCTGGCT GGGCATGCGC GTGTTCAAGA TGGAACGCGA GGCGGCGATG
CTGATCGGTG CCGGCAGCGC GATCTGCGGC GCGGCGGCGG TGATGGCCGC CGAACCGGTG
GTGCGCGGCC GTGCTGCGCA GGTCACGGTG GCGGTGTCGA CGGTGGTGGT GTTCGGCACG
CTGGCGATGT TCCTGTATCC CGCCCTGTAT GCGCTGGTGC AGTCGCACGG CTGGCTGGCG
ATGGACGCGC AGCAGTACGG CCTGTTCACC GGTGCGACGG TGCATGAAGT GGCACAGGTA
GTGGCGGCTG GCCGCGCGGT CAACGAAGCG GCGGCCGATA CCGCAGTGAT CACGAAGATG
GTGCGGGTGA TGCTGCTGGC ACCGTTCCTG GTCGCGCTGT CGCTGTGGCT GGCGCGTGAC
GGCAAGGCCA GCGCCGACGG CAGCAAGGCG CGCATCGTGG TGCCGTGGTT CGCTTTTGGT
TTCGTGGCGG TGGCCGGGTT CAACTCGCTG CATCTGCTGC CGGCCGGCCT TCAGACGGGG
CTGGTGCAGC TGGATACCGT GCTGCTGGCG ATGGCGATGG CCGCGCTGGG CCTGACCACC
CACGTTTCGG CGCTGCGCCA GGCCGGCCTG AAGCCGCTGC TGCTGGCGCT GATCCTGTTC
GGCTGGCTGC TGTTCGGCGG GCTGGCGATA CACCAGGGTG TGCTGGCGGT GCTGGGCTGA
 
Protein sequence
MNAPALSSWS LPALRQRWQP RLPGLLLVGL IAAASLYLAE LPWLQAHGLS ALTVAIVAGI 
VVGNTLYPRL APSSAAGVGF SKHWLLRAGI VLYGLRLTFQ DIGHVGVTGV LMDVLVVAST
FGLACWLGMR VFKMEREAAM LIGAGSAICG AAAVMAAEPV VRGRAAQVTV AVSTVVVFGT
LAMFLYPALY ALVQSHGWLA MDAQQYGLFT GATVHEVAQV VAAGRAVNEA AADTAVITKM
VRVMLLAPFL VALSLWLARD GKASADGSKA RIVVPWFAFG FVAVAGFNSL HLLPAGLQTG
LVQLDTVLLA MAMAALGLTT HVSALRQAGL KPLLLALILF GWLLFGGLAI HQGVLAVLG