Gene Smal_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1605 
Symbol 
ID6475475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1803728 
End bp1804852 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID642730787 
Productprephenate dehydrogenase 
Protein accessionYP_002027993 
Protein GI194365383 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.294712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.381468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC TGCAGGAACG CGCGCCGCGC ACGGTCGGCA TCATTGGTAG CGCCGGCGCC 
TATGGGCGCT GGTTGACCCG CTTCTTCCAG CAGCACATGC AGTTGCAGGT GATCGGCCAC
GACCCGGCCG ATGCCACCTC GCATACGCCG GAGCAGCTGT TGGCGCAGGC CGATGTGCTG
GTGTTCTCGG CGCCGATCCG GCACATGCCG GCGCTGATCG CCGAATACGT GCGGGAATCG
GCTGGTCGCG AGCGGGACCG CCTGTGGCTG GATGTGACTT CGGTAAAGGA GGCGCCGGTA
CAGGCGATGC TGGCCTCGCA GGCCGAAGTG GTCGGGCTGC ACCCGATGAC CGCTCCGCCC
AAGGCGCCGA CACTGAAGGG CCGGGTGATG GTGGTCTGCG AAGCACGGCT GCAGCACTGG
CAGCCGTGGG TCGACGCGTT GTGCGCGGCG CTGCAGGCCG AGTGCGTGCG CGCCACGCCG
CAGCACCACG ACCAGATGAT GGCGCTGGTG CAGGCGATGG TGCATGCCAC CCATCTGGCC
CAGGCCGGCG TGCTGCGCCA GTACCAGCCG CAGTTGGGTG ACCTTGCCGC GATGATGCCG
TACCGCTCCG CGTCATTCGA GCTGGATACG GCGATCATCT CGCGGATCCT GTCGCTGAAC
CCGGCGATCT ACGAGGACAT CCAGTTCGGC AACCCGTACG TGGCGCCGAT GCTGGAGCGC
CTGGTAGGCC AGTTGCAGGC CCTGCAGGTA CAGGTCGGGC AGGGTGACGA CACCGCGCGT
GCTGCGTTCC GCGAGCAGTC GCTGTCGGCC AACCACAATG CCTTCGGTGA GCAGGCGCTG
GCCGCAGGCA ACTACACCTT TGAACGGGTG GGCTACCTGC TGGCCGACCT GACCGAGCGC
AACGCGTTGT CGGTTCACCT TCCGGAAGAT CGTCCAGGTT CGTTGCGCGA GCTGCTGAAC
GTGTTCGAGC AGCATCGCAT CAGCCTGGCC TCGATCCATT CCTCGCGCAC CCCGGGCGGC
GAAGTGCATT TCCGTATCGG CTTTGTGGCG GGAAGTGATC CGGCCGCCAT CGCGCCGGCG
GCGGCCGAGG TGGATGCCAG CGGCATTGGG CGGGTGCTGG GCTGA
 
Protein sequence
MSGLQERAPR TVGIIGSAGA YGRWLTRFFQ QHMQLQVIGH DPADATSHTP EQLLAQADVL 
VFSAPIRHMP ALIAEYVRES AGRERDRLWL DVTSVKEAPV QAMLASQAEV VGLHPMTAPP
KAPTLKGRVM VVCEARLQHW QPWVDALCAA LQAECVRATP QHHDQMMALV QAMVHATHLA
QAGVLRQYQP QLGDLAAMMP YRSASFELDT AIISRILSLN PAIYEDIQFG NPYVAPMLER
LVGQLQALQV QVGQGDDTAR AAFREQSLSA NHNAFGEQAL AAGNYTFERV GYLLADLTER
NALSVHLPED RPGSLRELLN VFEQHRISLA SIHSSRTPGG EVHFRIGFVA GSDPAAIAPA
AAEVDASGIG RVLG