Gene Smal_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1553 
Symbol 
ID6475422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1746889 
End bp1748619 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content67% 
IMG OID642730735 
Productgamma-glutamyltransferase 
Protein accessionYP_002027941 
Protein GI194365331 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.89041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGT TGATCGTCCG CCCCCTGTTG CTGCTTGGCC TGCTGCTGAG CCCGATGGCC 
TGGGCCGACA GCTCGGTCCG TGCCGAGCGC CCCGATGGTG CGGCCATCGC CAGTGGCCAC
CGGCTGGCCA CCCAGGCCGG CATCGACATC CTGGCGCAGG GCGGCAACGC TTTCGACGCT
GCGGTGGCGG TGTCGTCCAC GCTGGCGGTG GTCGAGCCGA TCAGCTCGGG CCTTGGCGGC
GGCGGTTTCT TCCTGCTGCA TGATGCGGCC ACCGGCAAGG ACGTGATGCT GGACGCGCGC
GAGACCGCGC CGGCCGCTGC GACTCCGCAG GCCTACCTGG ACAAAAAGGG CGACCTCGAC
CGTGACCGCT CGGTCAACGG GCCGTGGTCG GCCGGCATTC CCGGCCTGCC TGCGGCGCTG
GTCGAGCTGT CGGCCAAGCA CGGCAAGCTG CCGTTGTCGG CTTCGCTGCA ACCGGCGATC
CGCATCGCGC GCGACGGTTT CCCGGTGTAC GACCGCATGG CCAAGGGCTA TGCCTCGCGC
CGTGAAGTGA TGGAGCGCTA CCCGGGGACG CGCGAAGTCT ACCTGCGCAA CGGCAAGCCG
ATCGCCACCG GCGACCTCTT CCAGCAGCCG GAACTGGCGC AGACCCTGGA ACGTCTCGCC
GCTGACGGCT TCGATGGCTT CTACAAGGGC CAGACCGGCA AGCTGCTGCT GGCCGGCGTG
AAACAGGCCG GTGGCAAATG GACCGCCGAG GAGCTGTCGG GCTATCGCGT GAAGCTGCGC
GAGCCGATCG TCTTCAACTA CCGCGACTGG AAGATCACCA CGGCGTCGCC GCCGTCTTCC
GGTGGCATCG CGCTCGCGTC GATGCTGCAG ATCCTGGAAG GCTGGGACCT GAAGTCGATG
GATGAGGCCC ACCGCACCCA CCTGGTGGTG GAAGCGATGC GCCGTGCCTA CCGTGACCGC
ACTTTCTTCC TCGGCGATCC GGACTTCGTG CAGATCCCGC AGAAGGTGCT GGTCAGCAAG
GACTACGCAC AGGGCCTGCG CGCCACCATC CATCCTGAGA AGGCCACCCC CAGCGACCTG
CTGTCGGGCA ACCCGACCCC GCTGGAGGAC GACGAGACCA CCCATTTCTC GATCATCGAC
CGCGACGGCA ACCGCGTCGG TGCCACCCAG ACCGTCAACC TGCTGTATGG CTCGGGCCTG
ATTCCGAAGG GCACCGGCGT GCTGCTGAAC AACGAGATGG ACGACTTCGC ACTGAAGCCG
GGTACGCCCA ACGCGTTCGG CGTGATGGGC TATGAGGCCA ATGCGCCGAA GCCGGGCAAG
CGCATGCTCA GCTCGATGAC GCCGACCTTC ATGGAGAACG CCGACAAGGT GGTGGTACTG
GGCACGCCGG GTGGCAGCCG CATCATCACC ATGGTGCTGC TGGGCATCCT TGGCTACGAC
GCGGGCCTGG ACGCGCAGCA GGTCGCTGCG CTGCCGCGCT ACCACCACCA GTGGCTGCCG
GACCTGATCG AAGCCGAGAA CGATGCGTTC GACGCCGACA CGGTAAAGCA GCTGCAGGCG
ATGGGCCACA AGATCGACCT GCCGGGCAAT GTCGCCGCCG GTGGCCGTGG CTCCAGCCAC
GTCTGGGGCA ACCTGCAGAC CGTGGAATGG GACCGCAAGG CGAACAAACT GTTCGGTGGC
AGCGACCCGC GTAACCCGGT GGGCAGTGCC CAGGTTGTAC CGGCACGCTG A
 
Protein sequence
MKTLIVRPLL LLGLLLSPMA WADSSVRAER PDGAAIASGH RLATQAGIDI LAQGGNAFDA 
AVAVSSTLAV VEPISSGLGG GGFFLLHDAA TGKDVMLDAR ETAPAAATPQ AYLDKKGDLD
RDRSVNGPWS AGIPGLPAAL VELSAKHGKL PLSASLQPAI RIARDGFPVY DRMAKGYASR
REVMERYPGT REVYLRNGKP IATGDLFQQP ELAQTLERLA ADGFDGFYKG QTGKLLLAGV
KQAGGKWTAE ELSGYRVKLR EPIVFNYRDW KITTASPPSS GGIALASMLQ ILEGWDLKSM
DEAHRTHLVV EAMRRAYRDR TFFLGDPDFV QIPQKVLVSK DYAQGLRATI HPEKATPSDL
LSGNPTPLED DETTHFSIID RDGNRVGATQ TVNLLYGSGL IPKGTGVLLN NEMDDFALKP
GTPNAFGVMG YEANAPKPGK RMLSSMTPTF MENADKVVVL GTPGGSRIIT MVLLGILGYD
AGLDAQQVAA LPRYHHQWLP DLIEAENDAF DADTVKQLQA MGHKIDLPGN VAAGGRGSSH
VWGNLQTVEW DRKANKLFGG SDPRNPVGSA QVVPAR