Gene Smal_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1545 
Symbol 
ID6475414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1738963 
End bp1740087 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID642730727 
ProductA/G-specific adenine glycosylase 
Protein accessionYP_002027933 
Protein GI194365323 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID[TIGR01084] A/G-specific adenine glycosylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.151581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.696978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC AGCCGCACGC CAGCGCCAAG ACTGCCCAGG AAGACGGCTT CGTCGCCCAC 
CTGCTGCATT GGTTCGACGA CCACGGCCGC CACGACCTGC CCTGGCAGCA CCCGCGCAGT
CCCTACCGGG TCTGGCTGTC GGAAATCATG CTGCAGCAGA CCCAGGTGAG TACGGTCATC
CCGTATTTCC AGCGGTTCCT GCAGCACTTC CCGACCCTGC CCGACCTTGC CGCCGCCAGC
AACGACGCGG TGATGGCGCA GTGGGCCGGG CTCGGCTACT ACGCCCGCGC ACGCAACCTG
CATGCCGCAG CCAAACGGTG CGTGGAACTG CACGACGGCG AACTGCCGCG CGACTTCGAT
GCATTGCATG CCCTGCCCGG CATCGGCCGC AGCACCGCCG GCGCGATCCT CAGCCAGGCC
TGGAACGATC CGTTCGCGAT CCTCGATGGC AACGTCAAGC GCGTGCTCAG CCGCTACCAC
GGCATCGAGG GTTTCCCCGG CCTGCCCGCG ATCGAGAAGC AGTTGTGGGC GATCGCCGAG
ACGCACGTGG CGCAGGTGCC GGCCGGGCGC ATGGCCGACT ACACCCAGGC GCAGATGGAT
CTGGGCGCGA CGGTGTGCAG CCGCGCCAAA CCGGCCTGCG TGATCTGCCC GCTGCAGGAT
GACTGCGTGG CACGGCGCGA AGGCCGCAGC GCCGAACTGC CGACCCCCAA GCCCAGCAAG
ACCCTGCCCG AGCGCGAGGC CGTTGCGCTG CTGCTGCGCG ACGCCCAGCA GCGCGTGCTG
CTGCAGAAGC GGCCGGATAC CGGCATCTGG GCGCAGCTGT GGACGCTGCC ACAGGCCGAG
GCCGGCAGCG TGCTGCAGGA CTGGTTCGAC CTGCACGTCG ACGGCTCGCT GGAAGAGGCC
GAAGAGCTGC CAGTGCTGCA GCACACCTTC AGTCACTACA AGCTGCATCT GCAGGTACTG
TCGCGACAGG TGCACGGCCT GCGCGTGGAA GAACCGACGC TGCGCTGGGT GGCCGCCGAC
GAACTGCCCG CGCTGGGCCT GCCGGCACCG ATCCGCAAAC TGCTCGACGG CGCAACGATC
AAGACGCCAA AACGAAATTC CAAGAAACCC CGCAACCACG AGTGA
 
Protein sequence
MPRQPHASAK TAQEDGFVAH LLHWFDDHGR HDLPWQHPRS PYRVWLSEIM LQQTQVSTVI 
PYFQRFLQHF PTLPDLAAAS NDAVMAQWAG LGYYARARNL HAAAKRCVEL HDGELPRDFD
ALHALPGIGR STAGAILSQA WNDPFAILDG NVKRVLSRYH GIEGFPGLPA IEKQLWAIAE
THVAQVPAGR MADYTQAQMD LGATVCSRAK PACVICPLQD DCVARREGRS AELPTPKPSK
TLPEREAVAL LLRDAQQRVL LQKRPDTGIW AQLWTLPQAE AGSVLQDWFD LHVDGSLEEA
EELPVLQHTF SHYKLHLQVL SRQVHGLRVE EPTLRWVAAD ELPALGLPAP IRKLLDGATI
KTPKRNSKKP RNHE