Gene Smal_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1516 
Symbol 
ID6475385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1713181 
End bp1713666 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID642730698 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_002027904 
Protein GI194365294 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0887546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTG CCTGGATCGG CCTCGGCGCC AACCTTGGCG ACGCGGCTGC AACCGTCCGC 
GCAGCGATTG CTGCGCTGGA TGGCCTGCCC GGCACCCGCG TGGACAGGGC GTCGCGCCTG
TACGCCACGC CGGCCTGGGG CAATGAAGAC CAGCCGCCGT TCGTCAACGC GGTGGCTGCG
GTCGAAACCG ATCTGCCGGC CGACGAACTG CTGCAGGCGA TGCTGTCGCT GGAGCGGCAC
TTCGGCCGCG TACGCGATCC GCAGGTGCAC TGGGGGCCGC GCGCGCTGGA TCTCGACCTG
CTGCTGCATG GCGCGCAGGT GATCGATCAG CCCGGCCTGC AGGTGCCGCA TCCCTATATG
CACGAACGCG CCTTCGTATT GGTGCCGCTG GCCGAAATCG CGCCGGATCT GGCCATTCCC
GGCCACGGCC GCGTGCAGGA TGCAGTGATG CGGGTGGATG CCTGCGGGAT CGCGCCGATA
GGGTGA
 
Protein sequence
MTLAWIGLGA NLGDAAATVR AAIAALDGLP GTRVDRASRL YATPAWGNED QPPFVNAVAA 
VETDLPADEL LQAMLSLERH FGRVRDPQVH WGPRALDLDL LLHGAQVIDQ PGLQVPHPYM
HERAFVLVPL AEIAPDLAIP GHGRVQDAVM RVDACGIAPI G