Gene Smal_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1466 
Symbol 
ID6475330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1648674 
End bp1649306 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID642730643 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_002027854 
Protein GI194365244 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.518607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCC GCAGCAAAAG CAGCCAGCGC TGGCTCAAGG AACACTTCTC CGACCCCTTC 
GTGAAGAAGG CCCAGGCCGA AGGCATGCGC TCACGCGCCG CCTACAAGCT CGAAGAGCTG
CTGGAACGTG ACCGGTTGCT GAAGCCGCAC ATGGTGGTGG TCGACCTCGG CGCAGCCCCG
GGCGGCTGGT CTCAGCAGGT TCGGAGACAG ATCGGCGACA CCGGCCGCGT CCTGGCATTG
GACATCCTGG ACATGCCGCC GCTGGCCGGC GTGGAGTTCC TTCATGGTGA CTTCAGGGAA
GAAACCGTTC TATCGCAGTT TGAAGCCATG CTCGGGGATC AGCCGGTAGA CCTTGTGCTG
TCGGACATGG CCCCCAATAA GAGTGGTGTA GGCGCGGTCG ACCAGCCGCG GATGATGCAC
CTGGCGGAGC TGGCCCTGGA TTTTGCCGAC AACCACCTGA AGACCGGTGG GGCGTTCCTG
ATCAAGCTGT TCCAGGGTGA AGGCTTTGAC GACTACGTGC GTGACATGCG CCGCCGGTAC
GACAAGGTCT CCATCCGCAA GCCGGAAGCG TCGCGCAAGC GCTCCCCCGA GGTGTATGCC
TTGGGTCAGG GAAAACGCGC CCACATGAAG TAA
 
Protein sequence
MATRSKSSQR WLKEHFSDPF VKKAQAEGMR SRAAYKLEEL LERDRLLKPH MVVVDLGAAP 
GGWSQQVRRQ IGDTGRVLAL DILDMPPLAG VEFLHGDFRE ETVLSQFEAM LGDQPVDLVL
SDMAPNKSGV GAVDQPRMMH LAELALDFAD NHLKTGGAFL IKLFQGEGFD DYVRDMRRRY
DKVSIRKPEA SRKRSPEVYA LGQGKRAHMK