| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1454 |
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| Symbol | ispD |
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| ID | 6475318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1640051 |
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| End bp | 1640749 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642730631 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002027842 |
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| Protein GI | 194365232 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CGATCTGGGT GGTGGTTCCG GCCGCCGGTC GTGGCGCCCG TTTCGGTGCG
CCGATGCCCA AGCAGTACCT GCAGGCGGGT GGGCAGATCC TGCTCGCCCA TACCCTGGAC
GCACTGCTGG CACATCCGGC GGTGGCCGGA GCGATGGTGG TGATCGGCCC GGACGATGCC
GACTGGCCGG GCTGGAGCGA ATGGGCCGGC AAGCCGGTGC TGACCTGTAT CGGTGGCGCT
ACCCGTGCGG CCTCGGTGCT GGCCGGGTTG CAGGCGCTGC CGGAGACGGT GCGCGCCGAT
GAATTCGTGC TGGTCCACGA CGCGGCGCGC CCGAACCTGT CGCCGGCCGA TCTCGGCCGC
CTGCTCGAAG TTGGTCGTGC CGACCCGGTC GGCGCGATTC TCGCCGCACC GGTGCGTGAC
ACCCTCAAGC GCGCTGGCGA CGATGGTGGC ATCGATGGTA CCGAGCCGCG CGAGCGCCTG
TGGCGCGCAT TGACGCCGCA ACTGTTCCGC CGCCATCAGC TCAGCCGCGC GCTGTCCGAA
GCCGCCACCG CCGGTGTGGA AGTCACCGAC GAGGCCATGG CCATGGAGCG CCAGGGCCAG
CGCCCGCTGC TGGTCGAAGG CAGCGAGGAC AACTTCAAGG TCACCACCCC GGCCGATCTG
GACCGGTTTG AATTCGTACT TTCCCGCCGC GCCGGCTGA
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| Protein sequence | MSAAIWVVVP AAGRGARFGA PMPKQYLQAG GQILLAHTLD ALLAHPAVAG AMVVIGPDDA
DWPGWSEWAG KPVLTCIGGA TRAASVLAGL QALPETVRAD EFVLVHDAAR PNLSPADLGR
LLEVGRADPV GAILAAPVRD TLKRAGDDGG IDGTEPRERL WRALTPQLFR RHQLSRALSE
AATAGVEVTD EAMAMERQGQ RPLLVEGSED NFKVTTPADL DRFEFVLSRR AG
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