Gene Smal_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1421 
Symbol 
ID6475284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1609912 
End bp1610745 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID642730597 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002027809 
Protein GI194365199 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACC GTCTCGCCAT TCTGCTTGAG CGCTTTTCGG TCACCGCTTC GGTGTTCCAT 
GCGGGTGCGC TGTGCGGCAT CAACAGCCTG GAGAGTGAAG ATGAGGCCGG CCAGCTGCAT
CTGGTGCGGC GCGGGCCGGT GCAGGTCAGC CACGGCCAGC AGACCGTGCA GGTCGAAGTG
CCGAGCCTGC TGCTGTATCC GCGACCGACG CCGCACCGCT TCAGCACCGA CCCACAGCAT
GGCGCCGACA TGGCCTGCGC CAACCTGCAC TTCGAAGGGG GCCGGCTGAA TCCGATCAGC
GCCGCGCTGC CCGATTTCAT CTGCCTGCCC TTGGCGGATC TGTATGGCGG CCACGCGGCG
CTGGAACTGC TGTTCGAAGA GGCCTTCGAG CAGCGTTGTG GCCGTGCGGC CATGGTCAAC
CGCCTGTTCG AGGTGGTGAT GATCCAGGTG CTGCGCCAGC TGATGGAAGG TGGCGAGATG
CGCGGTGGCC TGTTTGCCGG GCTCGGGCAT CCGCGGCTGC GGCTGGCGCT GGTGGCCATG
CACGAATCAC CGGCACAGGC GTGGACGCTG GAAGATCTGG CCGACGTCGC CGGGATGTCG
CGCAGTGTGT TCGCGGCCAG TTTCCGCGAG GCCATGGGAA CCACTCCAGG CCAGTACCTG
CAGGGCTGGC GGGTGGGCCT GGCGCAGCAG GCACTACGCC AGGGTAGGCC GCTGAAGCGG
ATTGCCGACG ACGTGGGCTA TGGCAGCGAA GCGGCGTTGT CGCGCGCGTT CAAGGCGCAC
ACCGGGCAGT CGCCACGGCA GTGGCGCGGG CAGGCCCGTG CCACTGCGGC CTGA
 
Protein sequence
MVDRLAILLE RFSVTASVFH AGALCGINSL ESEDEAGQLH LVRRGPVQVS HGQQTVQVEV 
PSLLLYPRPT PHRFSTDPQH GADMACANLH FEGGRLNPIS AALPDFICLP LADLYGGHAA
LELLFEEAFE QRCGRAAMVN RLFEVVMIQV LRQLMEGGEM RGGLFAGLGH PRLRLALVAM
HESPAQAWTL EDLADVAGMS RSVFAASFRE AMGTTPGQYL QGWRVGLAQQ ALRQGRPLKR
IADDVGYGSE AALSRAFKAH TGQSPRQWRG QARATAA