Gene Smal_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1402 
Symbol 
ID6475260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1591949 
End bp1593361 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content71% 
IMG OID642730573 
ProductNHL repeat containing protein 
Protein accessionYP_002027790 
Protein GI194365180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.649211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC AGCCCGTCCC GGACCTGCCC GAGTTCGCCA CCTGGCTCAA TGCCACCCCC 
TGCACCCTGA CCGAACTGCG CGGTCGGCCG GTGGCGCTGT TGTTCGTCAA CGCCGCCTCC
GCCTGGAGCG CGCAACGCCT GGCCGAGTTC GGCCAATGGC TGTCGCGCCA CCCCGGCAAG
CTGCAGCCGC TGGTGCTGCA GGTGCCGCGC TTCGATTTCG AACGTGAGGC CGACGCCGCA
CTGAAGCTGC TGCGTCGCCA GGGTCTGACG ATGCCGGTGC TGCTTGATGC CGACTGGGAT
GGCTGGCGCC GCTTCGGCGT CACCGCCTGG CCGACCATCG TGCTGCTGGA TGCGCAGGGG
CGCGAGCAAC AACGGTTGGT CGGGCAGGGC GCACCCGGCG AACTGGAGCG TGCCTTGAAC
GCGCTGTGCG AGGGCGCACC GTCGGCGCCG CCGCGCGGTG GCAGCGAGCT GCATCCGGAG
CCGCGCCACG CGCTGCGCTT CCCGCTTGGC CTGGCGGTCA GCACCGAACG CCTGTACATC
GCCGACAGCG GCCATCACCG CATCCTCGAA TGCAGCCACG GTGGCCGCAT CCTGCGCCAG
TTCGGGCTGG GCACTGCCGA TTTCATGGAT GGCAACCTCG CCGAGGCGGC CTTCCACCGC
CCGCAGGCGC TGGTGCTGGA GCGCGATTCG CTGTACGTCG CCGACACCGG CAACCATGCC
GTGCGCCGCA TCAACCTGCT GACCGGCATC GTCGACACCC TGTGCGGCAA CGGCCGTCCC
GGCGCGCCGG TGGAAGGCCC GGTCGCGCAG GCCAGGCAGG TGTCGCTGGA CCATCCGGTC
GGCCTGGCCA TCGCCGACAA CCAGCTGCAT ATCGCCATGG CCGGTGACAA CCGCATCTGG
AGCTACCACC TGGGCCAGCG CAGCCTGCAG TGGCGCGCCG GCAGCGGTTC CATCGACGAA
CGCGATGGCA GCGGCCACCT GGCTGCCTTT GCCCAGCCCA CCGCACTGGC CGTGGTGCAG
CAGGTGCTGT ACGTGGCCGA CGCGTTGGGT TCCTCGATCC GTGCGCTGCA GCTGCGTGGC
GACCTGGTGC AGACGCTGGT CGGGCAGGGG CCCTGGCGCT TCGGCAATGA GGACGGCCCG
CGCACCCAGG CCAGCCTGCA GTTTCCGCAG GCGATGGCAC TGAGCCCGGA TGCGCCGCTG
CTGTGGATCG CGGATACGGG CAACGGCCGC CTGCGCACCC TGCGCCTGGG CGGTGGTGAA
CTGACCACCC AGCCGCTGCC GCGCCGCCTG CATGGTCCGG CCGGTCTGGC AGCCGGTGCG
GGCGCGGTGT GGATCGCCGA GACCGATGCC CACGCCGTGC TGCGTTTCGA CCCCGACAGC
GGCGTGCTCA GCGAAGTCCC GATCAGCGAA TGA
 
Protein sequence
MNVQPVPDLP EFATWLNATP CTLTELRGRP VALLFVNAAS AWSAQRLAEF GQWLSRHPGK 
LQPLVLQVPR FDFEREADAA LKLLRRQGLT MPVLLDADWD GWRRFGVTAW PTIVLLDAQG
REQQRLVGQG APGELERALN ALCEGAPSAP PRGGSELHPE PRHALRFPLG LAVSTERLYI
ADSGHHRILE CSHGGRILRQ FGLGTADFMD GNLAEAAFHR PQALVLERDS LYVADTGNHA
VRRINLLTGI VDTLCGNGRP GAPVEGPVAQ ARQVSLDHPV GLAIADNQLH IAMAGDNRIW
SYHLGQRSLQ WRAGSGSIDE RDGSGHLAAF AQPTALAVVQ QVLYVADALG SSIRALQLRG
DLVQTLVGQG PWRFGNEDGP RTQASLQFPQ AMALSPDAPL LWIADTGNGR LRTLRLGGGE
LTTQPLPRRL HGPAGLAAGA GAVWIAETDA HAVLRFDPDS GVLSEVPISE