Gene Smal_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1401 
Symbol 
ID6475259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1591464 
End bp1591952 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID642730572 
Productprotein tyrosine phosphatase 
Protein accessionYP_002027789 
Protein GI194365179 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.595503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC TGGTCGTCTG CCTCGGCAAC ATCTGCCGTT CGCCGATGGC CGAAGGTGCG 
CTGCGCGCCT GCCTGGACGC GTCGCCGCTG GCTGGTCGGG TGCAGGTCGA TTCGGCCGGC
ACCGGCGACT GGCATGTGGG CGAGCCACCG GACCGGCGCG CGATCGCCTG CGCGGCCGGG
CATGGCGTGG ACATCGGCGG CCTGCGCGCG CGCCAGCTGC AGGTCGCGGA TTTCGACCGC
TTCGACTGGA TCCTGTGTGC CGATGAGGCC AACCTGCGGG ATGCCGGTCG CTTGGCCACC
CCCGCCCAGC GAGAACGCCT GGCGCTGTAC CTGCCGTGGT CCGGCGGGCA AGGCAGGGGT
GCGATCCCGG ACCCGTACAC CGGCGGCAGT GAGCATTTCG AACAGGTCTG GACATTGGTC
GACGATGCTG CAAAACGAGC AGTGGCACGA CTGTTGCATG ACGCCGACTC CGGCATAATC
GGGCCATGA
 
Protein sequence
MKLLVVCLGN ICRSPMAEGA LRACLDASPL AGRVQVDSAG TGDWHVGEPP DRRAIACAAG 
HGVDIGGLRA RQLQVADFDR FDWILCADEA NLRDAGRLAT PAQRERLALY LPWSGGQGRG
AIPDPYTGGS EHFEQVWTLV DDAAKRAVAR LLHDADSGII GP