Gene Smal_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1397 
Symbol 
ID6475255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1587432 
End bp1587854 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID642730568 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002027785 
Protein GI194365175 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GCAACGACCG ATCCCAGGAT GAGCCGCATA TCGACCTGGT GCCGCTGATC 
GACGTCATCC TGGTGCTGAT CATCTTCTTC GTGGTCACCA CCACGTTTGA CGCGCGTTCC
ACGCTGCAGG TGCAGCTGCC CACTGCCAGC CAGCAGCAGA CCAACGAGCC GCCGCGCTCG
CTGAGCGTGC TGATCAATGC CGAAGGCCGC TATTTCATCA ATGACCAGGA AGTGCTGCGC
AGCGACGTCG AGTCGGTCAA GCAGACCATC GCCGCCGTGG CCGGCAGCGA CCGTGAGCAG
ACCGTGCTGC TGCGTGCCGA CGCACGCACT CCCTACCAGG CCGTGGTGAC CGCGCAGGAT
GCGCTGGGTC AACTCGGTTT CCGCCGTATT GCCATTGCAA CAGCACCCGA GGTGCGTCCA
TGA
 
Protein sequence
MRIGNDRSQD EPHIDLVPLI DVILVLIIFF VVTTTFDARS TLQVQLPTAS QQQTNEPPRS 
LSVLINAEGR YFINDQEVLR SDVESVKQTI AAVAGSDREQ TVLLRADART PYQAVVTAQD
ALGQLGFRRI AIATAPEVRP