Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1297 |
Symbol | |
ID | 6475152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1479531 |
End bp | 1481489 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642730465 |
Product | ABC transporter related |
Protein accession | YP_002027685 |
Protein GI | 194365075 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA CGGCGCCGCT GCTGCGCCTG CGTGACCTGC GACGCGAATT CCCGGCCGGC GACGATGTGA TCGCCGTGCT GCGTGACGTC AACCTCGACA TCCACGCCGG TGAGATGGTG GCCATCGTCG GCCAGTCCGG CTCAGGCAAG TCGACGCTGA TGAACATCCT CGGCTGCCTC GATCGTCCCA CCCGTGGCAG CTACCAGGTG GCCGGCCGCG AAACCGGGAA GATGGCGCCG GACGAGCTGG CCGAACTGCG CCGCGAGCAT TTCGGCTTCA TCTTCCAGCG CTATCACCTG TTGGGCGACC TCGATGCACG CGGCAACGTG GAAGTGCCGG CGGTGTACGC CGGCAGCCCC GGCCCGGTGC GCAACGCGCG TGCCGAACAA CTGCTGCAGC GGCTGGGCCT GAGCGACCGC ATGCACCACA AGCCGGGCCA GCTGTCCGGC GGCCAGCAGC AGCGCGTGTC GATCGCCCGT GCCCTGATGA ACGGCGGCGA GGTGATCCTG GCCGACGAAC CGACCGGCGC GCTCGACACG AAATCCGGCG AGGAAGTGAT GGCGATCCTC GGCGAGCTGC ACGCCGAAGG CCACACCATC ATCATCGTCA CCCACGACAT GAGCGTGGCC GAACACGCGC AGCGCATCAT CGAGATCCGC GACGGCGAGA TCATCGCCGA CCGCGCCAAT CCGAATGCAC CGACCTACCG CGCGCAGCGC GAGGCCAGCA CCGGCGTCGC CCGCGGCAAC AGCTGGCGGG CCGCGCGCGA CCGCTTCACC GAAGCATTCC GCATGGCGTT GCTGGCGATG AATGCACATC GGCTGCGCAC CTTCCTGACC ATGCTCGGCA TCATCATCGG TATCGCCTCG GTGGTCTCGG TGGTGGCGCT GGGCAACGGC TCGCAGCAGC AGATCCTGCA GAACATCAGC GCGCTCGGCA CCAACACCAT CGATGTCTAC CCCGGCCGTG GTTTCGGCGA CATGCGCTCG GCCCGCGTGC AGACGCTCAA AGCCAGTGAT GCCGATGCGC TGGCCCGGCA GAGCTACGTC GACAGCTCCA CGCCCAGCGT GTCGACCTCG GTCACCGCGC GTTACCGCAA CCAGTCCTCC ACCGCCCAGG TCAGCGGCGT TGGCGAGCAG TTCTTCCGGG TCAAGGGCGT GACCCTGCTC AGCGGCAGCT TCTTCGACAG TGACGCGGTG AAGGGCCTCG GCCAGGTCGC GGTGATCGAC GAGAACACCC AGGCCCAGTT CTTCCCCGAT ACCGACCCGA TCGGCCAGGT GATCCTGCTC GGCAACGTGC CGGCGCGCGT GGTCGGCGTG GCCAAGCGCC AGAGCTTCGG GTTCGGCGGC AGCACCAGCC TGAGCGTGTG GCTGCCCTAC ACCACGGTGA TGTCGCGCAT GCTCGGCCAG AGCCACGTGT CCAGCATTAC CGTGCGCGTG GACGACGCCA CGCCGATGGA TGCGGCGCAG GAAGCGATCA CCCGCCTGTT GACGATGCGC CATGGCACCG AGGACTTCTT CCTCAGCAAC AGCGCCGAGA TCCGCCAGAC CATCGAGCAG ACCACGCGCA CGATGACCCT GCTGATCGGC GCCATCGCCG CCATCGCACT GCTGGTCGGT GGTATCGGCG TGATGAACAT CATGCTGGTG TCGGTGACCG AGCGTACCCG CGAGATCGGC GTGCGCATGG CCGTCGGTGC ACGGCAGAGT GATATCCGCC AGCAGTTCCT GATCGAAGCA GTGCTGGTGT GCCTGCTCGG CGGCGTGCTC GGCATCGGCC TGGCCCTGCT GCTGGGCTCG ATGATCGGCC GCTTCGCCAG CGACTTCCAG GTGCTGTTCT CCACCGCCTC GATCGTTGCC GCGTTCGCCT GCTCGACCCT GATCGGCGTG GCGTTCGGCT TCCTGCCCGC GCGCAACGCC GCGCAGCTCG ACCCGGTGGA GGCCCTGGCC CGCGAATGA
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Protein sequence | MSTTAPLLRL RDLRREFPAG DDVIAVLRDV NLDIHAGEMV AIVGQSGSGK STLMNILGCL DRPTRGSYQV AGRETGKMAP DELAELRREH FGFIFQRYHL LGDLDARGNV EVPAVYAGSP GPVRNARAEQ LLQRLGLSDR MHHKPGQLSG GQQQRVSIAR ALMNGGEVIL ADEPTGALDT KSGEEVMAIL GELHAEGHTI IIVTHDMSVA EHAQRIIEIR DGEIIADRAN PNAPTYRAQR EASTGVARGN SWRAARDRFT EAFRMALLAM NAHRLRTFLT MLGIIIGIAS VVSVVALGNG SQQQILQNIS ALGTNTIDVY PGRGFGDMRS ARVQTLKASD ADALARQSYV DSSTPSVSTS VTARYRNQSS TAQVSGVGEQ FFRVKGVTLL SGSFFDSDAV KGLGQVAVID ENTQAQFFPD TDPIGQVILL GNVPARVVGV AKRQSFGFGG STSLSVWLPY TTVMSRMLGQ SHVSSITVRV DDATPMDAAQ EAITRLLTMR HGTEDFFLSN SAEIRQTIEQ TTRTMTLLIG AIAAIALLVG GIGVMNIMLV SVTERTREIG VRMAVGARQS DIRQQFLIEA VLVCLLGGVL GIGLALLLGS MIGRFASDFQ VLFSTASIVA AFACSTLIGV AFGFLPARNA AQLDPVEALA RE
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