Gene Smal_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1292 
Symbol 
ID6475145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1472602 
End bp1473348 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID642730458 
Productprotein of unknown function DUF81 
Protein accessionYP_002027680 
Protein GI194365070 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.404695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.692055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CGACGTACTT CTATTCCCTG CTGGTGGCGG TGTTCGTGCT GGCCGGTGTG 
GTCAAGGGCG TGACCGGCAT GGGCCTGCCT ACGGTGGCGA TGGGCCTGCT GGGCGGCGCG
CTGTCACCGG TGGCGGCGGC ATCGATGCTG TTCATCCCGA CCTTCGTCAC CAATGCGTGG
CAGTTGTTGT CCGGCCCCTC ACTGGGCCAC ATCATGCGGC GCCTGTGGCC GATGATGCTG
GCGGTGGTGG TGGTGACGCT GGGTTCGGCC GCGTTGCTGG TACGGGTGGA TCGCACCTGG
TCGCGCATGG CCTTGGGAAT GGCGCTGGTG ATCTATGCCG CGTACGCGCT GTTTGCACCG
GTGTTCCGGG TGCCAGAACG GCGCGAGCGC TGGCTGGGGC CGCTGGTGGG TGCACTGTCC
GGCATGGTGA CTGGTGCGAC CGGCGTGTTC GTGATGCCGG CGGTGCCGTA CCTGCAATCG
CTGGGGCTGC AGCGCGAAGA GCTGGTGCAG GCGCTCGGGC TGGCGTTCAC CGTATCGACG
ATTTCACTGA CGACAGGTCT GGTGCTGCAT GGCGCGTTCG GTATCCAGCA ACTGGGCCTG
AGCGCATTGG CGGTGGTGCC GGCACTGCTG GGCATGTGGC TGGGGCAGGT GATCCGGCAG
CGGATCAGCG CACGCGTGTT CCGTGCGTGT TTCCTCGGGT TCCTGCTGCT GCTCGGGCTG
GAGCTGGTGC TGCGGCCGTT GTTCTGA
 
Protein sequence
MNETTYFYSL LVAVFVLAGV VKGVTGMGLP TVAMGLLGGA LSPVAAASML FIPTFVTNAW 
QLLSGPSLGH IMRRLWPMML AVVVVTLGSA ALLVRVDRTW SRMALGMALV IYAAYALFAP
VFRVPERRER WLGPLVGALS GMVTGATGVF VMPAVPYLQS LGLQREELVQ ALGLAFTVST
ISLTTGLVLH GAFGIQQLGL SALAVVPALL GMWLGQVIRQ RISARVFRAC FLGFLLLLGL
ELVLRPLF