| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1288 |
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| Symbol | |
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| ID | 6475140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1467950 |
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| End bp | 1469128 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642730453 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002027676 |
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| Protein GI | 194365066 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.230633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CCCAAGACAC TGCGGCCCCG GCCGCCCCCA ACCGCCGTGG CAATCTGCTG
CGCGGCCTGT TTGTGATCGT CGTGCTGCTG CTTGCCGCAC TGGCGCTGTG GTACTTCATG
TTCGGCCGTT GGTTCGAAGA AACCGACGAC GCTTACGTGC AGGGCAACCA GGTGCAGATC
ACCCCGCTGG TGGCCGGTAC CGTGGTCGCC ATCAACGCTG ATGACGGCAT GCGCGTGGAG
CGCGGCCAGC TGCTGGTGCA GCTGGACCCG TCCGATACCT CGGTGGCGCT GCAGCAGGCC
GAAGCCAACC TGGCCAAGAC CGTGCGCCAG ACCCGTGGCC TGTACCGCAG CGTGGAAGGC
GCACAGGCGG ATTTGAACGC CCGCCAGGTG ACCCTGAAGC GCGTGCGCGA CGACTTCGCC
CGCCGCAAGG ACCTGGCCGC CACCGGCGCC ATCTCCAACG AAGAACTGGC CCACGCCCGC
GATGAGCTGG CCGCTGCCGA AGCGGCCGTG GCCGGTTCGC GCGAGACGGT CGAGCGCAAC
CGCGCGCTGG TCGACGACAC CGTGATCGCC ACCCAGCCGG ATGTGCAGGC TGCCGCCGCG
CAGCTGCGCC AGGCCTTCCT CAACAACGCC CGCGCCGGCA TCGTCGCGCC GGTTACCGGC
TACGTGGCCC GTCGTTCGGT GCAGGTCGGC CAGCGCGTGC AGCCCGGCAA TGCCCTGATG
GCGGTGGTGC CGACCGAGCA GATGTGGGTC GAGGCCAACT TCAAGGAAAC CCAGCTGCGC
CACATGCGCC TGGGCCAGGA AGTGGAGCTG AAGTCGGACC TGTACGCCGG TGACGTGAAG
TACAAGGGCC GCATCGACAG CCTGGGCCTG GGCACCGGCT CGGCGTTCTC GCTGCTGCCG
GCACAGAACG CCAGCGGCAA CTGGATCAAG ATCGTGCAGC GCGTGCCGGT GCGTATCGCC
ATCGATGCCA AGCAGCTGGC CGAACATCCG CTGCGCATCG GCCTGTCGAT GAAGGCTGAA
GTGAGCCTGC GCGACCAGAA GGGCGAAGTG CTGCCGAGCA CCCCGGCCAA GGGCACGGTG
TTCGACACCG ACGTGTATGC CAAGCAGCTG CATGATGCCG ACGAGGTGAT CCACACGATC
ATCCAGGGCA ACCTGCCGCA GCAGGCGAAG GTGGGCTGA
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| Protein sequence | MSQTQDTAAP AAPNRRGNLL RGLFVIVVLL LAALALWYFM FGRWFEETDD AYVQGNQVQI
TPLVAGTVVA INADDGMRVE RGQLLVQLDP SDTSVALQQA EANLAKTVRQ TRGLYRSVEG
AQADLNARQV TLKRVRDDFA RRKDLAATGA ISNEELAHAR DELAAAEAAV AGSRETVERN
RALVDDTVIA TQPDVQAAAA QLRQAFLNNA RAGIVAPVTG YVARRSVQVG QRVQPGNALM
AVVPTEQMWV EANFKETQLR HMRLGQEVEL KSDLYAGDVK YKGRIDSLGL GTGSAFSLLP
AQNASGNWIK IVQRVPVRIA IDAKQLAEHP LRIGLSMKAE VSLRDQKGEV LPSTPAKGTV
FDTDVYAKQL HDADEVIHTI IQGNLPQQAK VG
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