| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1287 |
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| Symbol | |
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| ID | 6475139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1466442 |
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| End bp | 1467938 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642730452 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002027675 |
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| Protein GI | 194365065 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.193127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA TCCCGCATTC CACTCTCCGC CGGTCCGGGC GCGCGCTGCT GGTATCAGCG
CTGGCCCTGG CCTTGGCCGC CTGCGCCAGC AGTCGTGGCC TCAACCCGCA GGGCCATGTG
CTCGAAGTGG ACAGCCTGCA CAGTGAACGC ACCCTGGCCG ACACCGATCT GAGCGCCACC
GGCTTCCCCG CCCAGGACTG GTGGAAAGCG CTGGGCGATC CGCAGCTGGA CGCACTGATC
AGCGAAGGCC TGGCCGGCCA TCCGAGCCTG GATGCCGCCG ATGCACGCCT GCGCCAGGCG
CAGTCGCAGG TCGGCACCGC GCGTGCCGAT CGCCTGCCCA GCCTGTCGGT GTCCGGTGGT
TACACCGGTC TGCGCCTGCC CGAGTCGATG GCCGGCAGCG AGATGGGAGG CCATTACGCT
GGCAGCAGCC AGGTCGCGTT TGATTTCAGC TATGGCGTGG ACCTGTGGGG CGGCAAGCGC
GCTGCCTGGG AGGCCGCCGT GGATGGCGCG CATGCCGCCA CTGTTGAAGC CCAGGCCGCG
CGCCTGAACC TGTCGACCGG CATCGCCCAG GCCTATGCCG ACCTGGCCTA CGCGTGGCAG
CTCAACGACG TGGCCGAGGA AGAGCTGACC CGCTCGCAGA AGTCGCTTCA GCTGACCCGC
CAGCGCCGCA GCGCCGGCAT CGACAGCGAC CTGCAGGTGC GCCAGGCCGA GGCCCGCGTG
CCGGCCGCGC AGCAGCAGGT GCTGGCCGCA CAGCAGCGCA TCGACGCCGC CCGCACCGCG
CTGGCCGCCC TGGTCGGCAA GGGCCCGGAC CGTGGCCTGT CGATCCAGCG TCCGCAGGCA
TTGAACCCGA TGGCGCTGCA GCTGCCGGGC GTGCTGCCCA GCGAGCTGCT CGGCCGTCGT
CCGGAAATCG TTGCCGCGCG CTGGCGCGTG GAAGCGGCCG ACAAGCAGAT CAAGGTCGCC
AGGACCAAGT TCTACCCGAG CTTCAACCTG ACCGCACTGG CTGGCGTGGT CGCACCGAAC
GTGGGCGACC TGCTGAAGAG CAGCTCCACC TTCGCCTATA TCGGCCCGGC GCTGAGCCTG
CCGATCTTCG AAGGCGGCAA GCTGCGCGCC AACCTGGCCA ACACCGATGC GCAGTACGAC
CTGGCGGTAG CCAACTACAA CCAGACCGTG CTGGATGCAC TGCGCGACGT CGCTGACCAG
GTCAACGCGG TGCGCTCGCT GGCGCAGCAG TCGAACGCGC AACAGCAGGC GGTGGACACC
GCGCGTTCCG CCTTCGACCT GGCCCAGCAG CGCTATCGCG CCGGCATCGG CAGCTACCTG
GACGTGCTGA CCGCGCAATC CACCCTGCTG CAGTCACAGC AGCAGCTGGC CGGCCTGCAG
TCGCAGCAGG TGCAGACCTC GGTGCGCCTG AGCAAGGCGC TGGGCGGTGG TTTCCAGCCC
AGTGATGCCG ACCGCGCTGC GCCGCTCGCC TCCCATTCCG ATTCCTCGCA TTCCTGA
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| Protein sequence | MNPIPHSTLR RSGRALLVSA LALALAACAS SRGLNPQGHV LEVDSLHSER TLADTDLSAT
GFPAQDWWKA LGDPQLDALI SEGLAGHPSL DAADARLRQA QSQVGTARAD RLPSLSVSGG
YTGLRLPESM AGSEMGGHYA GSSQVAFDFS YGVDLWGGKR AAWEAAVDGA HAATVEAQAA
RLNLSTGIAQ AYADLAYAWQ LNDVAEEELT RSQKSLQLTR QRRSAGIDSD LQVRQAEARV
PAAQQQVLAA QQRIDAARTA LAALVGKGPD RGLSIQRPQA LNPMALQLPG VLPSELLGRR
PEIVAARWRV EAADKQIKVA RTKFYPSFNL TALAGVVAPN VGDLLKSSST FAYIGPALSL
PIFEGGKLRA NLANTDAQYD LAVANYNQTV LDALRDVADQ VNAVRSLAQQ SNAQQQAVDT
ARSAFDLAQQ RYRAGIGSYL DVLTAQSTLL QSQQQLAGLQ SQQVQTSVRL SKALGGGFQP
SDADRAAPLA SHSDSSHS
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