Gene Smal_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1281 
Symbol 
ID6475133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1457933 
End bp1459315 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID642730446 
Productsodium/hydrogen exchanger 
Protein accessionYP_002027669 
Protein GI194365059 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.345739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.428465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTAC AGACCGGGGG CCAGGCGCCG CCGATGAAAT GGGGATGGCG TTATCTGGCC 
TGGGCCGGCG TGCCATTGCT GGCCGGGGTG CTGCTGGCGC GGTATGCCGG GCCGGCAGCG
CCTGCGGCGG TCGCCCGTGC CTCGGTAGCC GCCGAAGGCA GCTGGGCGCA GCACCTTGCC
TCACCGCTGG GCCTGTTCCT GCTGCAGCTG CTGGTGCTGC TGCTGGTGGC CAAGGGCGCG
GGCGCGCTGC TCAAGCGCTT TGGACAACCG GCGGTGATCG GCGAGATGGC CGCTGGCCTG
ATGATGGGGC CGCTGGTGCT CGGCAGCCTG CTGCCGCAGC TGCATGGTGC CTTGTTCCCG
GCCAGTTCGC TGGGGCCGCT GGGCATGCTC AGCCAGCTGG GCGTGCTGAT GTTCCTGCTG
GTGGCCGGTG CCGAGCTGGA CCTGGCGGCG CTGCGTGGCC GCCGGCGCTT CGCCTTCACG
GTCAGCCATG CCGGCATCGC GGTGCCGTTC GTGCTTGGCG TCGCCCTGGC GATCTGGCTG
TATCCGCAGC ACGGCCCGCA GGGCGTGGGC TTCACTGCCT TCGCGCTTTT CGTTGGTATT
TCGATGAGCA TCACCGCGTT CCCCGTGTTG CTGCGCATCC TTGCCGATCG TGGGATCACA
CAGACGCCAT TGGGTCAGAC CGCGATCGCC TGCGCGGCAT TGGGCGATGC CACCGCCTGG
TGCCTGCTGG CCTTGATCGT CGCTGCGGCC CAGGCCAGCG GCTGGTTGCC GGCCAGCCTC
AACCTGCTGT GCGTGGTCGT GTTCGTGGCG CTGATGCTGG GGCTGGTGAA GCCGTGGTTT
GCCCGCCAGC AGATCGCGCC GGGCCGTGAG GGACGTTGGC TGCTGGGCAT CCTGCTGCTG
TCGCTGGCCA GTGCGCTGGT CACCGAGATG CTGGGCATCC ACGCCCTGTT CGGTGCATTC
GCTGCGGGCG TCGCGGTATC GTCCAACGCG CAGCTGCGCG ACCTGTTGAT GGCCCGCGTC
GAACCGTTCG CGGTGACCCT GCTGCTGCCG TTGTTCTTCG CCATGACCGG CCTGCGCATG
CGCGCCGATG CGCTGCAGGC CAGCGATATC GTGTTGTGCG TGGTGGTGAT TGCGGTGGCC
ACGGCCGGCA AGCTGCTGGG CACCTTCAGT GCCGCACGCA GCGCCGGCAT GCCCACACGC
GAAGCGTGGC GGCTGGGCGC GTTGATGAAC ACCCGTGGCC TGATGGAGCT GATCGTGCTC
AACCTGGGCT ACGAGCTGGG CCTGCTCGGC GACCGCCTGT TCGCGGTGCT GGTGATCATG
GCGTTGGTGA CCACGGCGAT GACCGGGCCG CTGCTGAACC TGATCGAGCG ACGCCGGGGC
TGA
 
Protein sequence
MGVQTGGQAP PMKWGWRYLA WAGVPLLAGV LLARYAGPAA PAAVARASVA AEGSWAQHLA 
SPLGLFLLQL LVLLLVAKGA GALLKRFGQP AVIGEMAAGL MMGPLVLGSL LPQLHGALFP
ASSLGPLGML SQLGVLMFLL VAGAELDLAA LRGRRRFAFT VSHAGIAVPF VLGVALAIWL
YPQHGPQGVG FTAFALFVGI SMSITAFPVL LRILADRGIT QTPLGQTAIA CAALGDATAW
CLLALIVAAA QASGWLPASL NLLCVVVFVA LMLGLVKPWF ARQQIAPGRE GRWLLGILLL
SLASALVTEM LGIHALFGAF AAGVAVSSNA QLRDLLMARV EPFAVTLLLP LFFAMTGLRM
RADALQASDI VLCVVVIAVA TAGKLLGTFS AARSAGMPTR EAWRLGALMN TRGLMELIVL
NLGYELGLLG DRLFAVLVIM ALVTTAMTGP LLNLIERRRG