Gene Smal_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1272 
Symbol 
ID6475124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1447177 
End bp1447704 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content65% 
IMG OID642730437 
ProductSpore coat U domain protein 
Protein accessionYP_002027660 
Protein GI194365050 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.723665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCCA CAGTTCGTCT CCCCTTGGCC CTGGTCCTGG CCCTGCTGGT TGCCGGCCCC 
GTCGCCGCTG CCGACACCGT CACTTTCAAC GTGCTGCTGA CCATCAACAA GGCCTGCACC
ATCACCGCGG CTGCGGCGAC CAACGTCAAC TTCGGCAATG CTGATTCAAG CTCCGTCACC
CCGCTGAATG CGCAAGGCAC GGTAACTGCC CAGTGCAGCG TGACCACCCC CTACACGATC
GCGCTCAATG CCGGCCTCAA CCCAGGCACC GCCGGCGATG TGACCACCCG CCGCATGCGC
AACACCGACT CCGGGGTGAC CGCCAACAAC TTCGTCGGCT ACCAGCTCTA CCAGGATTCG
GGCCACAACA CGGTATGGGG GGCCAGCACC GGCACCAACA CCGTGGCCGG CACCGGCACC
GGCGCCAACC AGGTCTACCA GGTGTATGGC CAGGTGGCCA ACCCCAGCGT CAACAACGCT
GCCCCAGGTT CCTACCAGGA CACCATCACC GCCACCATCA CCTATTGA
 
Protein sequence
MRSTVRLPLA LVLALLVAGP VAAADTVTFN VLLTINKACT ITAAAATNVN FGNADSSSVT 
PLNAQGTVTA QCSVTTPYTI ALNAGLNPGT AGDVTTRRMR NTDSGVTANN FVGYQLYQDS
GHNTVWGAST GTNTVAGTGT GANQVYQVYG QVANPSVNNA APGSYQDTIT ATITY