Gene Smal_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1271 
Symbol 
ID6475123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1446432 
End bp1447166 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID642730436 
Productpili assembly chaperone 
Protein accessionYP_002027659 
Protein GI194365049 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.760334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATGC CCCGCGGACG CCGCTTGCAA CAGCTGGCGT TGATGGTGCT CGCGTTGCCG 
CCTGCCTTCT GCATGGCGGC CAGCCTGCAG GTATCCCCCA CCCAGTTCGA ACTGCGCGCC
AACCAGAACG CCGAGGCGCT GTGGATCAGC AACAGCGGCA CCGAGCCGGT GCAGGTGCAG
GTGCGTATCT ACCGATGGCA GCAGGCCGAC GGGCGTGACC AGCTGGAAGC CAGTGACGCC
CTGCTGCCCA GCCCGCCCAT GCAGTCACTG GCGGCCGGCC AGCGGCAGCT GGTCCGCCTG
GTCCGCGTCG ATGCCAGCGC CCCCGCCGTC CAGCAGGCAT TCCGGGTCAT CGTCGATGAG
ATCCCTGCCT ATGACCCCAC CCGCCAGGGG ATGCAGTTCG TATTGCGCTA TTCCATTCCC
GTGTTCGTGC AACCCGAGGG CAAGCCACCC GCACCCCGGC TGCAGGCGCG GCTGATCCAG
GACGGTGCCG GCCCGGCAAT GCTGGAAGTG CACAACAGCG GCGATGGACA GGCGCAGGTC
GCCGACCTGG CCGTCCTGCT GGGCCAACGC AGCACGCCGT TGCTGCCTGG CCTGGTCGGC
TATGTGCTGC CCGGGCAGAC CATGCGCTGG GCGCTGCAGC AGGCCCCTGC ACAACTGGCA
GGCGGCATCT TCAGTGCGAG GATCAATGGT GGGTCGCAGC TTACGCCCCT GCCCACGACG
CCGCCGGCTC GCTGA
 
Protein sequence
MPMPRGRRLQ QLALMVLALP PAFCMAASLQ VSPTQFELRA NQNAEALWIS NSGTEPVQVQ 
VRIYRWQQAD GRDQLEASDA LLPSPPMQSL AAGQRQLVRL VRVDASAPAV QQAFRVIVDE
IPAYDPTRQG MQFVLRYSIP VFVQPEGKPP APRLQARLIQ DGAGPAMLEV HNSGDGQAQV
ADLAVLLGQR STPLLPGLVG YVLPGQTMRW ALQQAPAQLA GGIFSARING GSQLTPLPTT
PPAR