Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1271 |
Symbol | |
ID | 6475123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1446432 |
End bp | 1447166 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642730436 |
Product | pili assembly chaperone |
Protein accession | YP_002027659 |
Protein GI | 194365049 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.760334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATGC CCCGCGGACG CCGCTTGCAA CAGCTGGCGT TGATGGTGCT CGCGTTGCCG CCTGCCTTCT GCATGGCGGC CAGCCTGCAG GTATCCCCCA CCCAGTTCGA ACTGCGCGCC AACCAGAACG CCGAGGCGCT GTGGATCAGC AACAGCGGCA CCGAGCCGGT GCAGGTGCAG GTGCGTATCT ACCGATGGCA GCAGGCCGAC GGGCGTGACC AGCTGGAAGC CAGTGACGCC CTGCTGCCCA GCCCGCCCAT GCAGTCACTG GCGGCCGGCC AGCGGCAGCT GGTCCGCCTG GTCCGCGTCG ATGCCAGCGC CCCCGCCGTC CAGCAGGCAT TCCGGGTCAT CGTCGATGAG ATCCCTGCCT ATGACCCCAC CCGCCAGGGG ATGCAGTTCG TATTGCGCTA TTCCATTCCC GTGTTCGTGC AACCCGAGGG CAAGCCACCC GCACCCCGGC TGCAGGCGCG GCTGATCCAG GACGGTGCCG GCCCGGCAAT GCTGGAAGTG CACAACAGCG GCGATGGACA GGCGCAGGTC GCCGACCTGG CCGTCCTGCT GGGCCAACGC AGCACGCCGT TGCTGCCTGG CCTGGTCGGC TATGTGCTGC CCGGGCAGAC CATGCGCTGG GCGCTGCAGC AGGCCCCTGC ACAACTGGCA GGCGGCATCT TCAGTGCGAG GATCAATGGT GGGTCGCAGC TTACGCCCCT GCCCACGACG CCGCCGGCTC GCTGA
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Protein sequence | MPMPRGRRLQ QLALMVLALP PAFCMAASLQ VSPTQFELRA NQNAEALWIS NSGTEPVQVQ VRIYRWQQAD GRDQLEASDA LLPSPPMQSL AAGQRQLVRL VRVDASAPAV QQAFRVIVDE IPAYDPTRQG MQFVLRYSIP VFVQPEGKPP APRLQARLIQ DGAGPAMLEV HNSGDGQAQV ADLAVLLGQR STPLLPGLVG YVLPGQTMRW ALQQAPAQLA GGIFSARING GSQLTPLPTT PPAR
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