| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1270 |
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| Symbol | |
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| ID | 6475122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1444052 |
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| End bp | 1446424 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642730435 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_002027658 |
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| Protein GI | 194365048 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.465422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGCCT GCTGCACCGG ACTGGCATCG GTTTCCGTGC ATGGCGCCGG CCGCGGACTG
CCGGCTGGCG CCGACATCTC CGCTGAAGTC TCTCTGCCGG CCCCCACGCC ATTGACCGCG
CCGCAGGCGC TGTATCTGGA CACCAGCCTC AACCACGCCC CGCGCGGGCT GCTGCTGTTC
CACGAGCAGG CCGGGCGACT GCAGGCGCCC GCTGCCACGC TGCGCCAGCT CGGCTTTCCG
GTGCAGGGCG ATGCACCGGT TTATCTGGAT CAGATCACGC AGCTGGTGGT GCATTACGAC
GCCAGCCTTC AGGTTCTCGA CCTGCAGGTG CCGCTGCAGC AGCTGCAGCT GCCGGTGGCA
CAGCTGGGCA GGGGCAGCGA GACCGCTCCG GAGGCGCAGG TATCGCCGGG CATGGCTCTC
AATTACGACG TCTATGCAAG CCACAGCGAC GGGCTGGGCA ACGTCAGCCT CAACAGCGAC
CTGCGTCTGT TCGGGTTCGG CAACGGCACC CTGCGCAACA CCACACTGAT GCGCAGCTAC
CAGTTGCCCG GCGAAGGCTG GCAGCAGGAA TCGGTTCGGC TGGATACCAG CTGGCGCCTG
GACCTGCCAG AGCAGGCACT GACCCTGACC GTAGGCGATT TCTACAGCGG CTTTCTGGAA
TGGTCACGGC CGGCGCGCAT GGCCGGCATC CAGATCGGTC GAAACTACGG GCTGCAGCCG
TACCGTGTCC TGACCCCGAC GCCGGCCTTC CTCGGCGAGG CGGTGGTCCC CTCCAGTGTC
GAGCTGTACA TCGACGGCCT GCGCCAATAC AGCGGGCAGG TGCCGGTCGG CCCGTTCCAG
CTGGCGGCGC AGCCAGGCAT CAACGGCACG GGCACGGCGC AGGTGGTGGT CACCGATGCG
TTCGGCCGCA TGCAGACGCT GGATTTTTCC TTCTACGGCA CCCAGCAGCT GCTGGCCGCC
GGCCTGTCCG ACTGGTCGGC GGGCATCGGC CGGCTGCGGC GCGACTATGG CATCCACTCC
TTCCGCTACG ACGCCGACAC GGTTGCCAGC GCCACCCTGC GACGGGGCGT CAACAACCGC
TTCACTGCAG AGGCCCATGC CGAAGGCGGA GGCGGCATCG TCAACGCAGG GCTTGGCGGC
GCCTGGCTGC TGGGGCGGGC CGGTGTGCTC AGCGCCAACT GGAGCGAAAG CCGCGACGGC
CAGCGCAATG GCCGCCAGTA CGGCATGGGC TACAACTGGA ACAACCGCCG CTTCAACGTC
AATCTGGCCA GCCGCCGTAC CAGCGGCGAC TACCGCGATC TGGGCAGCCT GCAGGACAAC
GTACCGCCCC GGGTGAGCGA GCAGGCCTCC TTCGGCGTTG ACCTGGAGCA TCTGGGCTCG
TTCAGCATCA GCTATCTGCG CCTGGACCAG CCGCAACCAT TGCTGGACGC ACCGCAGCCG
GCGCCGCCGC AGGCGCTGCC CTTCAGCCGC AGCCGCTACC TGAGCCTGTT CTGGTCGCGC
GCGTTCGGCC GCTGGAATGC CTATCTGTCA GCCACCCAGG ACATCGACCA GCGGCGCAAC
CGCAGCGTCT ATCTATCGCT GGGCACCCGG CTTGGCGAGG ATCGCCAGGC CAGCCTGTCG
GCCCAGCGCA ATGGCGAGCG CCACTACGCC AGTGCCGAGA TCATGCGCCC GGTGCCCGGC
GATGGCAGCC GCGGCGGCCC CGGCTGGCGC CTGCAGGCAC GCGATGATGG CGGCGGCCTG
GCCGAGATTG GCGCACTGGG CGCTCATGGC CGCTATTCGG CCGGCATTTC CCGCAACAGC
GGCCAGACCT TCGCTTACGG CAATGCCAGC GGCAGCCTGG TATGGATGGC CGGCAGCGTG
TTCGCCGCGC GCGAGGTACC CGATGCCTTC GCGGTGGTGT CCACCGGCCG CCCCGGCGTT
CCGGTGCTGC TGGAGAACCG CCCGGTCGGC GTCACCGATG ACAAGGGCCT GCTGCTGGTC
ACCCCCCTTC TGTCGTGGCA GCGCAACCGC TTGACCATCG ACACCCTTGG CCTGCCCGCC
GATCTGCGCG CCGAACAGGT GGAGACACTT GCTACCCCAC GCCAGAGCGC CGGCATGCGG
GTGGAGTTCC CGCTGCGGCA ATCGCATGGT GCATTGCTGA CGCTGACAGA CGCCGATGGC
AAACCACTGC CGCTGGGTGC ACGGGTGCAG GGTCAGGGCA TCGCACCGAC CGTTATCGGG
CACGACGGCC AGGCCTGGCT GGAGTTCAGC GCCGAGGCGG CGACTCTGCT GATCGACAGT
GAGCTCGGCC GCTGCCGTGC GCAGGTGCAG CGGCCGGCAG CGGGCACGCG CCGGTTGCCG
GCGGTGCGCT GTATCGCCGA GCCACGGCCA TGA
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| Protein sequence | MLACCTGLAS VSVHGAGRGL PAGADISAEV SLPAPTPLTA PQALYLDTSL NHAPRGLLLF
HEQAGRLQAP AATLRQLGFP VQGDAPVYLD QITQLVVHYD ASLQVLDLQV PLQQLQLPVA
QLGRGSETAP EAQVSPGMAL NYDVYASHSD GLGNVSLNSD LRLFGFGNGT LRNTTLMRSY
QLPGEGWQQE SVRLDTSWRL DLPEQALTLT VGDFYSGFLE WSRPARMAGI QIGRNYGLQP
YRVLTPTPAF LGEAVVPSSV ELYIDGLRQY SGQVPVGPFQ LAAQPGINGT GTAQVVVTDA
FGRMQTLDFS FYGTQQLLAA GLSDWSAGIG RLRRDYGIHS FRYDADTVAS ATLRRGVNNR
FTAEAHAEGG GGIVNAGLGG AWLLGRAGVL SANWSESRDG QRNGRQYGMG YNWNNRRFNV
NLASRRTSGD YRDLGSLQDN VPPRVSEQAS FGVDLEHLGS FSISYLRLDQ PQPLLDAPQP
APPQALPFSR SRYLSLFWSR AFGRWNAYLS ATQDIDQRRN RSVYLSLGTR LGEDRQASLS
AQRNGERHYA SAEIMRPVPG DGSRGGPGWR LQARDDGGGL AEIGALGAHG RYSAGISRNS
GQTFAYGNAS GSLVWMAGSV FAAREVPDAF AVVSTGRPGV PVLLENRPVG VTDDKGLLLV
TPLLSWQRNR LTIDTLGLPA DLRAEQVETL ATPRQSAGMR VEFPLRQSHG ALLTLTDADG
KPLPLGARVQ GQGIAPTVIG HDGQAWLEFS AEAATLLIDS ELGRCRAQVQ RPAAGTRRLP
AVRCIAEPRP
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