Gene Smal_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1269 
Symbol 
ID6475121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1443036 
End bp1444055 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID642730434 
ProductSpore coat U domain protein 
Protein accessionYP_002027657 
Protein GI194365047 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.484388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC TACTGGGTGC GCTGCTGGCG CTGTGGCTGG GCATGCAGGC CCTGCCCGCG 
CAGGCCGCGA CCAGCTGTTC GCTGAGCAGC CCCACCCTGG CCTTCGGCAC GGTTTCCAAC
GGCCTGGTCG ATACCACCAC CTCCTTCACC ATCACCTGCA CCACCGGAGC CGTCGCCCTG
CTGGCCAATG TACGCGTCAC CTTCTGCGTG GGCCTGCCGG CGGGAACGGG CGGCACCACC
ATCACGCCAT CGCGCACGTT CGCCAACAGC TTCGGCGACC GCCTCAACTA CCAGATCTAC
AGCGACGCCA ACCGCACCAC CGTGATCGGC AGCAGCGTTG CCAGCAGTCC GGCCTGGGCC
ATGTACCAGA TGCAGTACCC GGTGCCGGCG CTGGGTGGAT CGGGGTCGGG CACGGTCATC
CTCTATGGCC GCTATCCCGC CAGCCAGGTG CTGTCGGCCG GCACATTCAC CAGCACCCTG
GCGGCGACAT TCCAGTACGC CTACAACGAA CCCCTGCTGG GTACGCCGCC CTACCCGGCC
AACTGCACCG TGGCTGCCCC CACCGTCACC GGCAACTCGG GCCTGATCAC CGCGACGATG
TCGGTGATCG CCAACGCCAC GGTCAATCCA GCCTGCGGCA CCTATGTAAC CGCACCGATG
GATTTTGGCA GCAGCACCGG CACGGTCCTG GCAAACATCG ACCGCACGGC GGTGTTCAGC
CTGACCTGCG TCAACCGCAG CCCGTTCCAG ATCGGCCTGG ACAATGGCAG CAATGCCGAT
GGCAGCGGCA ACCGGCGCAT GCGCGTGGGC ACTACCGGCG CGACCGTGCC CTATGAGCTG
TACCAGAACG CGGCCCGCAC ACTGCGCTGG GGCAACGTGC TCAACACCAG CACGGTGGCC
GGGACAGGCA ATGGGTCCGC CCAGAACCTC ACCATCTACG GCCGGGTCGC GCCAACGCCT
GCGACCTCCA CACCGCCGGG CGTCTATACC GATACGGTCA CGGTTACCAT TACCTACTGA
 
Protein sequence
MIRLLGALLA LWLGMQALPA QAATSCSLSS PTLAFGTVSN GLVDTTTSFT ITCTTGAVAL 
LANVRVTFCV GLPAGTGGTT ITPSRTFANS FGDRLNYQIY SDANRTTVIG SSVASSPAWA
MYQMQYPVPA LGGSGSGTVI LYGRYPASQV LSAGTFTSTL AATFQYAYNE PLLGTPPYPA
NCTVAAPTVT GNSGLITATM SVIANATVNP ACGTYVTAPM DFGSSTGTVL ANIDRTAVFS
LTCVNRSPFQ IGLDNGSNAD GSGNRRMRVG TTGATVPYEL YQNAARTLRW GNVLNTSTVA
GTGNGSAQNL TIYGRVAPTP ATSTPPGVYT DTVTVTITY