Gene Smal_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1260 
Symbol 
ID6475112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1435075 
End bp1435911 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content68% 
IMG OID642730425 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_002027648 
Protein GI194365038 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.655167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA CCCGAGTCCT CGCCGCGCTG ATCATGGCGC CGGTCGCCAT TGCCGCGATC 
CTGCTGCTGC CGACGCAATG GCTGGCCGCC GCCGCCGCTG CCGTGCTGCT GATCGGCCTG
TGGGAGTGGC TGAAACTGGC CGGGATCGAA GACACCCTGG CGCGTACCGT GCTGCTGGTG
CTGAACCTGC TGCTGATGGT GCTGCTTGTC TGGGCCGATG GCAGCACGCT GGTGCTGTTC
CAGATCACCA CCCTGGCCGG CGTTGCCTGG TGGCTGGCAG CGCTGGTCTG GCTGCGCTTC
TTCAACTTCG GCGCACAGCC TTCGGCGCCC TCGCGGATCG TGAAGATGCT GGCCGGCACC
CTGGCCATCG TCCCGGCCTG GGCCGCGCTG GTACTGATCC ACGCTGGTGG CGATCCGCCT
GGCAAGCAGG GCCACCTGTG GCTGCTGGCC GCGCTGGCGC TGGTCTGGGC CGCCGATTCG
GGCGCCTATT TCGCGGGTCG TCACTTCGGC AAGCACAAGC TGGCCCCGCG CATCAGCCCG
AACAAGACCT GGGAAGGCCT GTTCGGTGGC CTGCTGGCCG GTGTCGCCGT GGCCGTCGGC
CTGGGCTGGC TGGCCGGCAT CGACATCGCA CACCTGCCGG GCCTGCTGAT CACCTCGGTG
GTGGCCGTGT TCGCCTCGGT GCTGGGCGAT CTGTTCGAGA GCCTGATCAA GCGCCACGCC
GGTGCCAAGG ACTCGGGACA CCTGATCCCG GGCCATGGTG GCGTGCTCGA CCGTGTCGAC
GGTGTTCTCG CCGCCGTGCC TGTGTTCGCG CTGGGCAAGG AAATCTTCGG GTTCTGA
 
Protein sequence
MTKTRVLAAL IMAPVAIAAI LLLPTQWLAA AAAAVLLIGL WEWLKLAGIE DTLARTVLLV 
LNLLLMVLLV WADGSTLVLF QITTLAGVAW WLAALVWLRF FNFGAQPSAP SRIVKMLAGT
LAIVPAWAAL VLIHAGGDPP GKQGHLWLLA ALALVWAADS GAYFAGRHFG KHKLAPRISP
NKTWEGLFGG LLAGVAVAVG LGWLAGIDIA HLPGLLITSV VAVFASVLGD LFESLIKRHA
GAKDSGHLIP GHGGVLDRVD GVLAAVPVFA LGKEIFGF