Gene Smal_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1251 
SymboldnaE 
ID6475103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1421504 
End bp1425094 
Gene Length3591 bp 
Protein Length1196 aa 
Translation table11 
GC content66% 
IMG OID642730416 
ProductDNA polymerase III subunit alpha 
Protein accessionYP_002027639 
Protein GI194365029 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.477204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACT CCCGCTTCGT ACATCTCCAC GTCCACACCG AGTTCTCGCT GGCGGACTCG 
ACCATCCGTG TGCCGGCCAA GCCCGATCAG GCCGACCCGA AGAAGGCCAA GCAGGCCAAC
CTGCTGTCGC GCTCGGTCGA GCTTGGCCTG CCCGCGCTGG CGGTGACCGA CCTCAACAAC
CTGTTCGCCC TGGTCAAGTT CTACAAGGCG GCCGAAGGCG TGGGCATCAA GCCGATCGCC
GGCGCCGACG TGCTGATCGC CGAGGAAGGC CAGGACCCGT GGCGGATGAC CCTGCTGTGC
CGCGACCGTG AGGGCTACCT GAGCCTGTCG CGCCTGCTGA CCCGCGCCTG GATGGAAGGC
CATCGCCCGG AAGGCGGCGT GGCAATCCAC CCGGACTGGC TGAAGGCCGG CAACGCCAAC
CTGTTCGCAC TCGCTGGCCG GCAGAGCCTG GCCGGGCGCC TGGCGCTGGA CGGCAAGCAT
GAACTGGCCG AGCAGCAGCT GGCCGACTGG CAACGCGTGT TCGGCGACGG CCTGCACCTG
GAGCTGACCC GCACCGGCCG CGAGGGCGAG GAAACCTTCA ACCAGTTCGC GCTGATGGCC
GCAGGCCAGC GTGGCCTGCC GGTGGTGGCC AGCAACGACG TACGCTTCCT GTCGCCGACG
GATTTCAGCG CGCACGAAGC GCGCGTGTGC ATTTCCACCG GCCGCGTGCT GGACGACCCC
AAGCGCCCGC GCGAGTACAG CGACCAGCAG TACCTGAAGT CGGCCGAGGA GATGTGTGCG
CTGTTCGCCG ACATCCCCGA TGCGATCGAC AACACACTGG CGCTGGCCGA ACGCTGCAAC
ATCGAGATGC GGCTGGGCAC CTACTTCCTG CCCAACTACC CGGTGCCCGA CGACGAGACC
CTGGACACCT GGATCCAGAA GATGTCGCGC GACGGCCTGG AAGAGCGCCT GGAGAAGAAT
CCGCTGGCGC CGGGCAAGAC CCGCGAGGAG TACTTCGAAC GCCTGGAGTT CGAGCTCAAC
ACCATCATCA AGATGGGCTT CCCGGGTTAC TTCCTGATCG TTGCCGACTT CATCCAGTGG
GGCAAGAACC AGGGCATCCC GATCGGCCCG GGCCGTGGTT CGGGTGCCGG CTCACTGGTG
GCGTGGGCGC TGAAGATCAC CGACCTGGAC CCGCTGCCGT ACAACCTGCT GTTCGAGCGA
TTCCTCAACC CGGAACGCGT GTCGATGCCC GACTTCGACA TCGACTTCTG CATGGATCGC
CGCGACGAAG TGATCGACTA CGTTGCGCGC AAGTACGGGC GCGAGCGCGT CAGCCAGATC
ATCACCTACG GCACCATGGC CGCCAAGGCA GTGGTGCGTG ACTCCGGCCG CGTGCTCGGT
TTCCCGTACG GCCTGGTCGA CGGTGTCTCC AAGCTGATCC CGAACATCCT CGGCATCCAC
CTGAAGGATG CGCTGGGCAA GGGCAAGGAA GGCCCGAGCT CGGAAATGGC CTCGGCCGAA
CTGATCCAGC GCTACGAGAG CGAGGACGAT GTCCGCGACC TGATCGACCT GGCGCTGCAG
CTGGAAGACC TGACCCGCAA CGCCGGCAAG CACGCCGGTG GCGTGGTGAT CGGGCCGGAG
CCGCTGAGCG AGTTCTGCCC GTTGTACGCC GAACACGACG AGAACGGGCT CGGCAAGAAC
CCGGTCACCC AGTTCGACAA GAACGACGTG GAAGAAGTGG GCCTGGTGAA GTTCGACTTC
CTCGGCCTGC GCACGCTGAC CATCATCGAC TGGGCGGTGA AGGCGATCAA CAAGCGCCAT
GAGCGCGCCG GCATTCCGCC GGTGGACATC GCCGCAATCC CGCTCGACGA CACGCCCACC
TACAAGGACA TCTTCGCCAA CGGCAATACC GGCGCGGTGT TCCAGTTCGA ATCCTCGGGC
ATGCGGCGCC TGCTGAAGGA CGCGCGCCCT GACCGGTTCG AAGACCTGAT CGCGCTGGTG
TCGCTGTACC GCCCCGGCCC GATGGACCTG ATTCCTTCCT TCAACGCGCG TAAGCACGGC
CAGGAAGAAA TCATCTATCC CGATCCGCGT ACCGAAGCGA TCCTGAAGGA CACCTACGGC
ATCATGGTGT ACCAGGAGCA GGTGATGCAG ATGGCGCAGA TCGTCGGCGG CTACTCGCTG
GGCGGCGCCG ACCTGCTGCG CCGCGCGATG GGCAAGAAGG TGCCGGCCGA AATGGCCAAG
CACCGCGAGA TCTTCCGCGA AGGTGCGGCC AAGGACGGTG TGGACGAAGC CAAGGCCGAT
GCGATCTTCG ACCTGATGGA GAAGTTCGCC GGCTACGGCT TCAACAAGTC GCACGCCGCC
GCCTACGCGC TGGTCAGTTA CCAGACCGCC TGGCTCAAGC GTCATTACCC GGCCGAGTTC
ATGGCGGCCA CGCTGTCCTC GGACCTGGAC AACACCGAGA AGGTGGTGGG CTTCCTGGAC
GAGGTGCGCA ACCTCGGCCT GACCGTGCTG CCGCCGAAGG TGAACCACTC GGCCTTCATG
TTCGAAGCGG TTACCCCGGA CACCATCCAG TACGGCCTGG GCGCGATCAA GGGCGTCGGC
CAGGGTGCCT GCGAGGCGGT GGTGGACGAA CGCCTGAAGG GCGGCGACTA CAAGGACCTG
CTCGACTTCT GCACCCGCGT CGGTTCGGCC AAGCTCAACC GGCGCACGCT GGAGGCGATG
ATCAACTGCG GCGCGCTGGA CGAGCTGGGC CACAACCGCG CCTCGTTGAT GCTGCAGCTG
CCGGAAGTGA TCAAGGCCAC CGAGCAGATG GCGCGCGAGC GTGCCTCCGG CCAGAATTCG
CTGTTCGGCG GGCCCGACCC AAGCACGGTG ACCATCCAGC TGGACCTTCC CGAAGCCGAG
GAATGGCCGC TGCTGCAGCG CCTCAATGGC GAGCGCGACA CGCTGGGCTT CTACCTCAGC
GGGCATCCGT TCGACCCGTG GCGCGACGAC GTGCGCGACC TGGTCGGTAC TGACCTGGGT
TCGGTGGAAA AGATCTGGAG CGCCAACAGC GGTGGCGGTG GCGGCGGCGA GAAGCGCTGG
CGACCGGAGG TGCAGACGGT GCTGGCCGGC CAGGTGGTCG GCGTGCGCCG CAAGGGTGAG
AGCCAGATCT TCATCCAGCT CGAAGATGGT CGCGGTCGCG TCGAGTGCAG CGCGTTCTCC
GACGCGATGG CCGAGTTCGG CCACCTGATG ACCAAGGACC GCATCCTGGT GGTCAAGGGC
GGCCTGCGCG AGGACGAATT CAACGGTGGT TTCGCATTGC GCATCCGCCA GTGCTGGGAC
TTCGACGAAG TCTGCGCCAA CTACGCCACG AGGTTGTCGC TGCGCCTGGA CCTGCGCCAG
CAGCGCCCGG TCTGGGAACG CATCGATGCG CTGCTCGACC GCCATCGCCC CGGCCGCACG
CCACTGCGCC TGGACCTGCT GCTGAAGGGC CCGCATGGCG GTGTTGCCGG CATGCTCGAT
GTCTCCGGAC AGAGTGCGGT ACGCATCGAT TCCAAGCTGA TGGAGGCGCT GCGCGCCGAC
CCGGCCGTGC GCACGCTGAA GGTGCGCTAC AGCCCGCCGT GGGCCAGCTG A
 
Protein sequence
MSNSRFVHLH VHTEFSLADS TIRVPAKPDQ ADPKKAKQAN LLSRSVELGL PALAVTDLNN 
LFALVKFYKA AEGVGIKPIA GADVLIAEEG QDPWRMTLLC RDREGYLSLS RLLTRAWMEG
HRPEGGVAIH PDWLKAGNAN LFALAGRQSL AGRLALDGKH ELAEQQLADW QRVFGDGLHL
ELTRTGREGE ETFNQFALMA AGQRGLPVVA SNDVRFLSPT DFSAHEARVC ISTGRVLDDP
KRPREYSDQQ YLKSAEEMCA LFADIPDAID NTLALAERCN IEMRLGTYFL PNYPVPDDET
LDTWIQKMSR DGLEERLEKN PLAPGKTREE YFERLEFELN TIIKMGFPGY FLIVADFIQW
GKNQGIPIGP GRGSGAGSLV AWALKITDLD PLPYNLLFER FLNPERVSMP DFDIDFCMDR
RDEVIDYVAR KYGRERVSQI ITYGTMAAKA VVRDSGRVLG FPYGLVDGVS KLIPNILGIH
LKDALGKGKE GPSSEMASAE LIQRYESEDD VRDLIDLALQ LEDLTRNAGK HAGGVVIGPE
PLSEFCPLYA EHDENGLGKN PVTQFDKNDV EEVGLVKFDF LGLRTLTIID WAVKAINKRH
ERAGIPPVDI AAIPLDDTPT YKDIFANGNT GAVFQFESSG MRRLLKDARP DRFEDLIALV
SLYRPGPMDL IPSFNARKHG QEEIIYPDPR TEAILKDTYG IMVYQEQVMQ MAQIVGGYSL
GGADLLRRAM GKKVPAEMAK HREIFREGAA KDGVDEAKAD AIFDLMEKFA GYGFNKSHAA
AYALVSYQTA WLKRHYPAEF MAATLSSDLD NTEKVVGFLD EVRNLGLTVL PPKVNHSAFM
FEAVTPDTIQ YGLGAIKGVG QGACEAVVDE RLKGGDYKDL LDFCTRVGSA KLNRRTLEAM
INCGALDELG HNRASLMLQL PEVIKATEQM ARERASGQNS LFGGPDPSTV TIQLDLPEAE
EWPLLQRLNG ERDTLGFYLS GHPFDPWRDD VRDLVGTDLG SVEKIWSANS GGGGGGEKRW
RPEVQTVLAG QVVGVRRKGE SQIFIQLEDG RGRVECSAFS DAMAEFGHLM TKDRILVVKG
GLREDEFNGG FALRIRQCWD FDEVCANYAT RLSLRLDLRQ QRPVWERIDA LLDRHRPGRT
PLRLDLLLKG PHGGVAGMLD VSGQSAVRID SKLMEALRAD PAVRTLKVRY SPPWAS