Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1251 |
Symbol | dnaE |
ID | 6475103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1421504 |
End bp | 1425094 |
Gene Length | 3591 bp |
Protein Length | 1196 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642730416 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_002027639 |
Protein GI | 194365029 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.477204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACT CCCGCTTCGT ACATCTCCAC GTCCACACCG AGTTCTCGCT GGCGGACTCG ACCATCCGTG TGCCGGCCAA GCCCGATCAG GCCGACCCGA AGAAGGCCAA GCAGGCCAAC CTGCTGTCGC GCTCGGTCGA GCTTGGCCTG CCCGCGCTGG CGGTGACCGA CCTCAACAAC CTGTTCGCCC TGGTCAAGTT CTACAAGGCG GCCGAAGGCG TGGGCATCAA GCCGATCGCC GGCGCCGACG TGCTGATCGC CGAGGAAGGC CAGGACCCGT GGCGGATGAC CCTGCTGTGC CGCGACCGTG AGGGCTACCT GAGCCTGTCG CGCCTGCTGA CCCGCGCCTG GATGGAAGGC CATCGCCCGG AAGGCGGCGT GGCAATCCAC CCGGACTGGC TGAAGGCCGG CAACGCCAAC CTGTTCGCAC TCGCTGGCCG GCAGAGCCTG GCCGGGCGCC TGGCGCTGGA CGGCAAGCAT GAACTGGCCG AGCAGCAGCT GGCCGACTGG CAACGCGTGT TCGGCGACGG CCTGCACCTG GAGCTGACCC GCACCGGCCG CGAGGGCGAG GAAACCTTCA ACCAGTTCGC GCTGATGGCC GCAGGCCAGC GTGGCCTGCC GGTGGTGGCC AGCAACGACG TACGCTTCCT GTCGCCGACG GATTTCAGCG CGCACGAAGC GCGCGTGTGC ATTTCCACCG GCCGCGTGCT GGACGACCCC AAGCGCCCGC GCGAGTACAG CGACCAGCAG TACCTGAAGT CGGCCGAGGA GATGTGTGCG CTGTTCGCCG ACATCCCCGA TGCGATCGAC AACACACTGG CGCTGGCCGA ACGCTGCAAC ATCGAGATGC GGCTGGGCAC CTACTTCCTG CCCAACTACC CGGTGCCCGA CGACGAGACC CTGGACACCT GGATCCAGAA GATGTCGCGC GACGGCCTGG AAGAGCGCCT GGAGAAGAAT CCGCTGGCGC CGGGCAAGAC CCGCGAGGAG TACTTCGAAC GCCTGGAGTT CGAGCTCAAC ACCATCATCA AGATGGGCTT CCCGGGTTAC TTCCTGATCG TTGCCGACTT CATCCAGTGG GGCAAGAACC AGGGCATCCC GATCGGCCCG GGCCGTGGTT CGGGTGCCGG CTCACTGGTG GCGTGGGCGC TGAAGATCAC CGACCTGGAC CCGCTGCCGT ACAACCTGCT GTTCGAGCGA TTCCTCAACC CGGAACGCGT GTCGATGCCC GACTTCGACA TCGACTTCTG CATGGATCGC CGCGACGAAG TGATCGACTA CGTTGCGCGC AAGTACGGGC GCGAGCGCGT CAGCCAGATC ATCACCTACG GCACCATGGC CGCCAAGGCA GTGGTGCGTG ACTCCGGCCG CGTGCTCGGT TTCCCGTACG GCCTGGTCGA CGGTGTCTCC AAGCTGATCC CGAACATCCT CGGCATCCAC CTGAAGGATG CGCTGGGCAA GGGCAAGGAA GGCCCGAGCT CGGAAATGGC CTCGGCCGAA CTGATCCAGC GCTACGAGAG CGAGGACGAT GTCCGCGACC TGATCGACCT GGCGCTGCAG CTGGAAGACC TGACCCGCAA CGCCGGCAAG CACGCCGGTG GCGTGGTGAT CGGGCCGGAG CCGCTGAGCG AGTTCTGCCC GTTGTACGCC GAACACGACG AGAACGGGCT CGGCAAGAAC CCGGTCACCC AGTTCGACAA GAACGACGTG GAAGAAGTGG GCCTGGTGAA GTTCGACTTC CTCGGCCTGC GCACGCTGAC CATCATCGAC TGGGCGGTGA AGGCGATCAA CAAGCGCCAT GAGCGCGCCG GCATTCCGCC GGTGGACATC GCCGCAATCC CGCTCGACGA CACGCCCACC TACAAGGACA TCTTCGCCAA CGGCAATACC GGCGCGGTGT TCCAGTTCGA ATCCTCGGGC ATGCGGCGCC TGCTGAAGGA CGCGCGCCCT GACCGGTTCG AAGACCTGAT CGCGCTGGTG TCGCTGTACC GCCCCGGCCC GATGGACCTG ATTCCTTCCT TCAACGCGCG TAAGCACGGC CAGGAAGAAA TCATCTATCC CGATCCGCGT ACCGAAGCGA TCCTGAAGGA CACCTACGGC ATCATGGTGT ACCAGGAGCA GGTGATGCAG ATGGCGCAGA TCGTCGGCGG CTACTCGCTG GGCGGCGCCG ACCTGCTGCG CCGCGCGATG GGCAAGAAGG TGCCGGCCGA AATGGCCAAG CACCGCGAGA TCTTCCGCGA AGGTGCGGCC AAGGACGGTG TGGACGAAGC CAAGGCCGAT GCGATCTTCG ACCTGATGGA GAAGTTCGCC GGCTACGGCT TCAACAAGTC GCACGCCGCC GCCTACGCGC TGGTCAGTTA CCAGACCGCC TGGCTCAAGC GTCATTACCC GGCCGAGTTC ATGGCGGCCA CGCTGTCCTC GGACCTGGAC AACACCGAGA AGGTGGTGGG CTTCCTGGAC GAGGTGCGCA ACCTCGGCCT GACCGTGCTG CCGCCGAAGG TGAACCACTC GGCCTTCATG TTCGAAGCGG TTACCCCGGA CACCATCCAG TACGGCCTGG GCGCGATCAA GGGCGTCGGC CAGGGTGCCT GCGAGGCGGT GGTGGACGAA CGCCTGAAGG GCGGCGACTA CAAGGACCTG CTCGACTTCT GCACCCGCGT CGGTTCGGCC AAGCTCAACC GGCGCACGCT GGAGGCGATG ATCAACTGCG GCGCGCTGGA CGAGCTGGGC CACAACCGCG CCTCGTTGAT GCTGCAGCTG CCGGAAGTGA TCAAGGCCAC CGAGCAGATG GCGCGCGAGC GTGCCTCCGG CCAGAATTCG CTGTTCGGCG GGCCCGACCC AAGCACGGTG ACCATCCAGC TGGACCTTCC CGAAGCCGAG GAATGGCCGC TGCTGCAGCG CCTCAATGGC GAGCGCGACA CGCTGGGCTT CTACCTCAGC GGGCATCCGT TCGACCCGTG GCGCGACGAC GTGCGCGACC TGGTCGGTAC TGACCTGGGT TCGGTGGAAA AGATCTGGAG CGCCAACAGC GGTGGCGGTG GCGGCGGCGA GAAGCGCTGG CGACCGGAGG TGCAGACGGT GCTGGCCGGC CAGGTGGTCG GCGTGCGCCG CAAGGGTGAG AGCCAGATCT TCATCCAGCT CGAAGATGGT CGCGGTCGCG TCGAGTGCAG CGCGTTCTCC GACGCGATGG CCGAGTTCGG CCACCTGATG ACCAAGGACC GCATCCTGGT GGTCAAGGGC GGCCTGCGCG AGGACGAATT CAACGGTGGT TTCGCATTGC GCATCCGCCA GTGCTGGGAC TTCGACGAAG TCTGCGCCAA CTACGCCACG AGGTTGTCGC TGCGCCTGGA CCTGCGCCAG CAGCGCCCGG TCTGGGAACG CATCGATGCG CTGCTCGACC GCCATCGCCC CGGCCGCACG CCACTGCGCC TGGACCTGCT GCTGAAGGGC CCGCATGGCG GTGTTGCCGG CATGCTCGAT GTCTCCGGAC AGAGTGCGGT ACGCATCGAT TCCAAGCTGA TGGAGGCGCT GCGCGCCGAC CCGGCCGTGC GCACGCTGAA GGTGCGCTAC AGCCCGCCGT GGGCCAGCTG A
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Protein sequence | MSNSRFVHLH VHTEFSLADS TIRVPAKPDQ ADPKKAKQAN LLSRSVELGL PALAVTDLNN LFALVKFYKA AEGVGIKPIA GADVLIAEEG QDPWRMTLLC RDREGYLSLS RLLTRAWMEG HRPEGGVAIH PDWLKAGNAN LFALAGRQSL AGRLALDGKH ELAEQQLADW QRVFGDGLHL ELTRTGREGE ETFNQFALMA AGQRGLPVVA SNDVRFLSPT DFSAHEARVC ISTGRVLDDP KRPREYSDQQ YLKSAEEMCA LFADIPDAID NTLALAERCN IEMRLGTYFL PNYPVPDDET LDTWIQKMSR DGLEERLEKN PLAPGKTREE YFERLEFELN TIIKMGFPGY FLIVADFIQW GKNQGIPIGP GRGSGAGSLV AWALKITDLD PLPYNLLFER FLNPERVSMP DFDIDFCMDR RDEVIDYVAR KYGRERVSQI ITYGTMAAKA VVRDSGRVLG FPYGLVDGVS KLIPNILGIH LKDALGKGKE GPSSEMASAE LIQRYESEDD VRDLIDLALQ LEDLTRNAGK HAGGVVIGPE PLSEFCPLYA EHDENGLGKN PVTQFDKNDV EEVGLVKFDF LGLRTLTIID WAVKAINKRH ERAGIPPVDI AAIPLDDTPT YKDIFANGNT GAVFQFESSG MRRLLKDARP DRFEDLIALV SLYRPGPMDL IPSFNARKHG QEEIIYPDPR TEAILKDTYG IMVYQEQVMQ MAQIVGGYSL GGADLLRRAM GKKVPAEMAK HREIFREGAA KDGVDEAKAD AIFDLMEKFA GYGFNKSHAA AYALVSYQTA WLKRHYPAEF MAATLSSDLD NTEKVVGFLD EVRNLGLTVL PPKVNHSAFM FEAVTPDTIQ YGLGAIKGVG QGACEAVVDE RLKGGDYKDL LDFCTRVGSA KLNRRTLEAM INCGALDELG HNRASLMLQL PEVIKATEQM ARERASGQNS LFGGPDPSTV TIQLDLPEAE EWPLLQRLNG ERDTLGFYLS GHPFDPWRDD VRDLVGTDLG SVEKIWSANS GGGGGGEKRW RPEVQTVLAG QVVGVRRKGE SQIFIQLEDG RGRVECSAFS DAMAEFGHLM TKDRILVVKG GLREDEFNGG FALRIRQCWD FDEVCANYAT RLSLRLDLRQ QRPVWERIDA LLDRHRPGRT PLRLDLLLKG PHGGVAGMLD VSGQSAVRID SKLMEALRAD PAVRTLKVRY SPPWAS
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