Gene Smal_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1237 
Symbol 
ID6475089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1408178 
End bp1409986 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content66% 
IMG OID642730402 
Productprotein of unknown function DUF885 
Protein accessionYP_002027625 
Protein GI194365015 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.157803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.118959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGC ATCTTCTTGC CCTCGCCCTG GTCGCCGCCC TGGCCGGTTG CCAGCCGGCC 
GACGCCCCGA CCAACGGTTC CACCCCGGCC GCCAACCAGC AGGCCGGTGA CGCGGCGGTT
GATGCCGCCT TCGCCGACCT GTCCAAGCGC GCCCTGGACA CCTGGATGCA GCTCTCGCCG
GTCAGCGCCA CCCAGATCGG TGACCACCGC TACGACAGCG AGATCGACGA CCTGAGCGCC
GCCGGCCAGC AGAAGACCCT GGCCGCCTAC AAGGCGCTGC TGGGCGAGCT GGACAAGATC
GAGGTGGCCA AGCTCGGCCG CGAAAACCAG GTGGACGCGG CGATCCTGCG CAACCAGCTG
CAGTCCGAGA TCTGGAATGC CGAGGTCATG CAGTCCGGCA AGTGGGACCC GCAGCTGTAC
AACGGCGTGG CCGGCAGCGC GATCTACGGC CTGATGGCCC GTGAGTTCGC ACCGCTGCCC
GAGCGCCTGA AGTCGGCCAC CGCGCGCATG GAGAAGCTGC CGGCGATCTT CGCCCAGGCC
CGCGAGAACC TGGATCCGGC CCGCGTGCCG AAGATCCATG CCGAGACGGT GGCCAAGCAG
AACAAGGGCA TCCTCAGCAT CGTCGATACC TTCATCACCC CGCACATCGG CGAACTGCCG
CAGGCCGACC AGCAGCGCCT GCAGGCCGCC ATCGATGGCC TGAAGAAGGC CGTGGACGAG
CAGCAGACCT GGCTGGACAA GACCCTGGTG CCGAACGCCA AGGGCGACTT CCGCATCGGT
GCGGAAAAGT ACGACCAGAA GCTGAAATTC GCGCTGAACT CGTCGCTGTC GCGCCAGGAG
ATCGGTGAGC GAGCACGCGC CGAACTCAAG CGCGTGCGCG AAGACATGTA CGGCATCGCG
CAGACCGTGC TGAAGGACAA GCCGGGCGCA CCGGAGATGC CGGCACAGCC GACCGACGAG
CAGCAGCAGA AGGCGATCGA GGCCGCGCTG GAGCTGGCCT ACGCCGACAA GCCGGCACGC
GACAAGGTCG TCGACGATGC CAAGGCCGCA CTGGAGCAGT CCACCGCATT CGTGCGCGAG
CACGATCTGA TGACCCTGCC CGACGCGCCG GTGGACATCA TCCTGATGCC GGAATTCCAG
CGTGGCGTGG CCGTGGCCTA CTGCGATTCG CCGGGCCCGC TGGACAAGAA CCTGAAGACC
TTCTACGCCG TGTCGCCGAT TCCGGACGAC TGGAACGACA AGCAGGTCGA CTCGTTCCTG
CGTGAGTACA ACTCGCGCAT GATCCACCTG CTGAGCATCC ACGAAGGCAC CCCGGGCCAC
TACCTGGAAG GCTGGCATTC GGCCAAGTTC CCCTCCACCC TGCGTGCGGT GCTGCGTTCT
GGCCTGTTCG CCGAAGGCTG GGCGGTCTAC ACCGAGCGCA TGATGCAGGA GCAGGGTTAC
CTCAACAACG ACCCGCTGTT CCACCTGGTG CAGCTGAAGT TCTACCTGCG CACGATCTCC
AACGCGATCC TCGACCAGGG CGTGCACGTG GACAACTGGG ATCGCGAAAA GGCGATGCAC
CTGATGACCC ACGACGCCTT CCAGCAGGAG AGCGAAGCCT CGGGCAAGTG GGTGCGCGCG
CAGCTGACCT CGGCACAGCT GCCGACCTAC TTCGTCGGTG CGCAGGAACA CTTCGACACC
CGCAAGGCGA TGCAGGACAA GCTGGGCGAC AAGTTCAACC TCAAGGCCTA TCACGACCAG
ATGCTGTCCT ACGGCGCCCC GCCGGTGCGC TTCGCACGCC AGCTGATGCT GGACCAGCCG
ATCGAGTGA
 
Protein sequence
MRPHLLALAL VAALAGCQPA DAPTNGSTPA ANQQAGDAAV DAAFADLSKR ALDTWMQLSP 
VSATQIGDHR YDSEIDDLSA AGQQKTLAAY KALLGELDKI EVAKLGRENQ VDAAILRNQL
QSEIWNAEVM QSGKWDPQLY NGVAGSAIYG LMAREFAPLP ERLKSATARM EKLPAIFAQA
RENLDPARVP KIHAETVAKQ NKGILSIVDT FITPHIGELP QADQQRLQAA IDGLKKAVDE
QQTWLDKTLV PNAKGDFRIG AEKYDQKLKF ALNSSLSRQE IGERARAELK RVREDMYGIA
QTVLKDKPGA PEMPAQPTDE QQQKAIEAAL ELAYADKPAR DKVVDDAKAA LEQSTAFVRE
HDLMTLPDAP VDIILMPEFQ RGVAVAYCDS PGPLDKNLKT FYAVSPIPDD WNDKQVDSFL
REYNSRMIHL LSIHEGTPGH YLEGWHSAKF PSTLRAVLRS GLFAEGWAVY TERMMQEQGY
LNNDPLFHLV QLKFYLRTIS NAILDQGVHV DNWDREKAMH LMTHDAFQQE SEASGKWVRA
QLTSAQLPTY FVGAQEHFDT RKAMQDKLGD KFNLKAYHDQ MLSYGAPPVR FARQLMLDQP
IE