Gene Smal_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1230 
Symbol 
ID6475082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1399580 
End bp1400740 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content68% 
IMG OID642730395 
ProductSMC domain protein 
Protein accessionYP_002027618 
Protein GI194365008 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.086198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGA CCCTGGCCAT CGCCCACTAC CGCTCGTTGC ACGGGTTGGT GCTGCCGCTG 
CAGCAGCTGA ACGTGGTCAC CGGCGACAAT GGCAGCGGCA AATCCAGCCT GTACCGCGCG
CTGCGCCTGC TGGCGGAGAC CGCGCAGGGC GGCGTCGCGG CGGTGCTGGC CCGTGAAGGC
GGCCTCGCTT CGGCGCTGTG GGCGGGCCCG GAAAAAATAG ATCGACGGGT CACTGCCGGC
GAGATTCCAT TGCAAGGCGG CCCACGCCAG GAATCGGTGG GACTGAAGCT TGGCTTCACT
ACTGACGAAT TCGGCTATGC CATCGATCTG GGCTACCCGC CACCGAGCCG CTCCGCGTTC
GCACTGGACC CGCAGATCAA GGCCGAGGCG ATCTGGGCCG GGCCGTTCCT GCGCAGTGCC
AACCTGCTGG TCGACCGCCG TGGTGCAATG GTGCGGCAAC GCCATGCGCA TGGCTGGGAT
CTGGTTGACG AACACGTGTC ACTGTTCGAC AGCCTGTTCA CCCAGGTCGG CGATCCGCAG
CGCATGCCGG AGACCATCGC CCTGCGCGAG TACATCCGCC GCTGGCGCTT CTACGATCAT
TTCCGCAGTG ATGCCGACGC ACCGGCGCGA CAGCCGGCGA TGGCCACACG CACGCCGGTG
CTGCATCACG ACGGCCGCGA TCTGGCCGCA GCGTGGGTGA CCATTCTCGA GATCGGCGAT
CCGGGCGCAC TGGCACGCAG CGTGGACGAT GCTTTCCCGG GTGCCACGGT CAGCTTCGAG
CCGCTGGATG GCCGGCTGGG CCTGCGCTTC CACCAACCCG GCCTGCTGCG GCCGTTGTCG
ATGGCCGAGC TGTCCGACGG CACGCTGCGC TTCCTGCTGT TGGCCGCTGC GCTGCACACG
CCGCGCCCGC CGCCGCTGTT GGTGCTCAAC GAGCCGGAGA CCAGCCTGCA TCCCGATCTC
CTGCCGGCGC TGGCGCGGCT TATCATCGCC GCCAGCACAC GCAGCCAGGT ATGGGTGGTG
TCACACGCCA GCCGCCTGAT CGCGGCGCTG GAACAGGCAC CCGGATGCCA CTCGCTGCAC
CTGCAGAAGG AACAGGGACG CACGCTGTTG AGTGGGCAGG GCCTGCTGGA TGCACCGGCA
TGGCATTGGC CGCAGCGCTG A
 
Protein sequence
MLQTLAIAHY RSLHGLVLPL QQLNVVTGDN GSGKSSLYRA LRLLAETAQG GVAAVLAREG 
GLASALWAGP EKIDRRVTAG EIPLQGGPRQ ESVGLKLGFT TDEFGYAIDL GYPPPSRSAF
ALDPQIKAEA IWAGPFLRSA NLLVDRRGAM VRQRHAHGWD LVDEHVSLFD SLFTQVGDPQ
RMPETIALRE YIRRWRFYDH FRSDADAPAR QPAMATRTPV LHHDGRDLAA AWVTILEIGD
PGALARSVDD AFPGATVSFE PLDGRLGLRF HQPGLLRPLS MAELSDGTLR FLLLAAALHT
PRPPPLLVLN EPETSLHPDL LPALARLIIA ASTRSQVWVV SHASRLIAAL EQAPGCHSLH
LQKEQGRTLL SGQGLLDAPA WHWPQR