| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1217 |
|---|
| Symbol | |
|---|
| ID | 6475069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1383089 |
|---|
| End bp | 1384342 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642730382 |
|---|
| Product | Nucleotide diphosphatase |
|---|
| Protein accession | YP_002027605 |
|---|
| Protein GI | 194364995 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.446386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0486309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCG TACGCCTGAC CTGCGCGCTG GCGCTGCTGC TGCCATTGGC GGCCTGCACC
ACCACCGCGC CCGCCCCTTC CACCTCCGTT CCCACTTCCG TCGCTGCGGC TGCACCGCCG
AAGCTGCTGC TGATCTCCAT CGACGGCCTG CGCGCCGATG CGCTGGACCG CGGCCTGACC
CCGAACCTGC AGCGACTGAT CGACGGCGGC GTGCGTGCAC GCTGGATGAC CCCGTCCTAT
CCGTCGCTGA CCTTCCCCAA CCACTACACC ATCGTCACCG GCCTGCGCCC GGACCACCAC
GGCATCGTCA ACAACAGCAT GGACGATGCA GCGTTGGGCC GGTTCGAGCT GAGCAACCGT
GAGGCGGTCA CCACCAGCGG CTGGTGGGGC GGCGAACCGA TCTGGGTCGG CGCCGAGAAC
GCCGGGGTGC GTTCGGCCAC CACCTCGTGG CCGGGCAGTG AATCGGAAAT CCGCGGTGTG
CGCCCGAGCC AGTGGCGCGT GTACGACGGC AAGGAACCGC TGGAACAACG CGCGGGCACC
GTGCTGGACT GGCTTGCACA GACCGATGCC GACGCACCGC GCCTGACTAC GCTGTACATG
GAACACGTGG ACAAGGCCGG CCACAACTAC GGCCCCGAAT CGAAGCAGTA CGCCGACGCC
ATCGTGCGCG CCGACCAGAT CATCGGCCAG GTACTCGACG GCCTGCAGCA ACGCGGCCTG
GCCGCGACCA CCAACGTGAT CGTGGTCTCC GACCATGGCA TGGCCAGCGT CCCGGTCGGC
CAGGTGATCT CCACCGAATC AATGGTCGAC CCGGCCATCG CACGCAACGT CAGCCAGGGC
CAGTCGGTGG GTTTTGCGCC GTTGGTCGGT CACGAGGCCG CCGCCGAGCG CGCCCTGCTC
GGTCGTCACG ACCGGTATGA GTGCTGGAAG AAAGAGAATC TGCCGGCGCG CCTGCACTAC
GGCACTCATC CGCGCGTTCC CGCCATTGTC TGCGTGATGG ATGAAGGCTG GGATGCCCTG
CATCAGGAGA AGATCGCCAA GCGCGACCAT CAGGATCGTG GCTCGCACGG CTATGACAAT
GCCCTGCCGT CGATGCGTGC GGTGTTCGTG GCCAGCGGCC CGTCGTTCCG CCAGGGCCTG
GTGATCGACG GCTTCGACAA TGTCGACGTC TACCCGCTGC TGGCGCACCT GCTGCAGGTA
CCGGCGGCGC CGAACGACGG GAATGCGGAG ACGCTGACGA AGACGCTGCG CTGA
|
|---|
| Protein sequence | MTSVRLTCAL ALLLPLAACT TTAPAPSTSV PTSVAAAAPP KLLLISIDGL RADALDRGLT
PNLQRLIDGG VRARWMTPSY PSLTFPNHYT IVTGLRPDHH GIVNNSMDDA ALGRFELSNR
EAVTTSGWWG GEPIWVGAEN AGVRSATTSW PGSESEIRGV RPSQWRVYDG KEPLEQRAGT
VLDWLAQTDA DAPRLTTLYM EHVDKAGHNY GPESKQYADA IVRADQIIGQ VLDGLQQRGL
AATTNVIVVS DHGMASVPVG QVISTESMVD PAIARNVSQG QSVGFAPLVG HEAAAERALL
GRHDRYECWK KENLPARLHY GTHPRVPAIV CVMDEGWDAL HQEKIAKRDH QDRGSHGYDN
ALPSMRAVFV ASGPSFRQGL VIDGFDNVDV YPLLAHLLQV PAAPNDGNAE TLTKTLR
|
|---|
| |